CCG27325

Description : Cysteinyl-tRNA synthetase [Ensembl]. DALR domain, tRNA synthetases class I (C) catalytic domain [Interproscan].

Gene families : OG_02_0000454 (OrthoFinder) Phylogenetic Tree(s): OG0000454_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: CCG27325
Cluster	HCAA: Cluster_11

Target	Alias	Description	ECC score	Gene Family Method
AAC73628	cysS, b0526	cysteinyl-tRNA synthetase [Ensembl]. DALR domain, tRNA...	0.08	OrthoFinder
AAL19491	STM0537, cysS	cysteine tRNA synthetase [Ensembl]. DALR domain, tRNA...	0.04	OrthoFinder
ADK86838	cysS, MPNE_0412	cysteine--tRNA ligase [Ensembl]. tRNA synthetases class...	0.05	OrthoFinder
AGT25553	N559_3917	cysteinyl-tRNA synthetase [Ensembl]. tRNA synthetases...	0.02	OrthoFinder
AKP14970	cysS, WX61_00907	Cysteine--tRNA ligase [Ensembl]. DALR domain, tRNA...	0.05	OrthoFinder
CBI66224	cysS, HPB8_667	Cysteinyl-tRNA synthetase [Ensembl]. DALR domain, tRNA...	0.02	OrthoFinder
KNA58930	VCV51_032620	cysteinyl-tRNA synthetase [Ensembl]. DALR domain, tRNA...	0.05	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	IEA	Interproscan
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004812	aminoacyl-tRNA ligase activity	None	Extended
MF	GO:0004817	cysteine-tRNA ligase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005737	cytoplasm	IEA	Interproscan
MF	GO:0016874	ligase activity	None	Extended
MF	GO:0016875	ligase activity, forming carbon-oxygen bonds	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140098	catalytic activity, acting on RNA	None	Extended
MF	GO:0140101	catalytic activity, acting on a tRNA	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0000049	tRNA binding	IEP	Enrichment
MF	GO:0000287	magnesium ion binding	IEP	Enrichment
MF	GO:0003676	nucleic acid binding	IEP	Enrichment
MF	GO:0003723	RNA binding	IEP	Enrichment
BP	GO:0006508	proteolysis	IEP	Enrichment
BP	GO:0006807	nitrogen compound metabolic process	IEP	Enrichment
BP	GO:0006996	organelle organization	IEP	Enrichment
BP	GO:0008104	protein localization	IEP	Enrichment
BP	GO:0008150	biological_process	IEP	Enrichment
BP	GO:0009058	biosynthetic process	IEP	Enrichment
BP	GO:0015031	protein transport	IEP	Enrichment
BP	GO:0019538	protein metabolic process	IEP	Enrichment
BP	GO:0033036	macromolecule localization	IEP	Enrichment
BP	GO:0043170	macromolecule metabolic process	IEP	Enrichment
BP	GO:0045184	establishment of protein localization	IEP	Enrichment
BP	GO:0071705	nitrogen compound transport	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR015273	Cys-tRNA-synt_Ia_DALR	344	396
IPR032678	tRNA-synt_1_cat_dom	15	314

External Links

No external refs found!