CCL20423 (BN171_4410001)


Aliases : BN171_4410001

Description : Putative RNA polymerase sigma factor Tn916-like, CTn1-Orf4 [Ensembl]. Sigma-70 [Interproscan].


Gene families : OG_02_0004375 (OrthoFinder) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CCL20423
Cluster HCCA: Cluster_10


Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006352 DNA-templated transcription, initiation IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003678 DNA helicase activity IEP Enrichment
MF GO:0004386 helicase activity IEP Enrichment
MF GO:0004803 transposase activity IEP Enrichment
BP GO:0006040 amino sugar metabolic process IEP Enrichment
BP GO:0006050 mannosamine metabolic process IEP Enrichment
BP GO:0006051 N-acetylmannosamine metabolic process IEP Enrichment
BP GO:0006811 ion transport IEP Enrichment
BP GO:0006812 cation transport IEP Enrichment
BP GO:0006813 potassium ion transport IEP Enrichment
MF GO:0008094 ATPase, acting on DNA IEP Enrichment
MF GO:0008556 P-type potassium transmembrane transporter activity IEP Enrichment
MF GO:0015079 potassium ion transmembrane transporter activity IEP Enrichment
MF GO:0015662 P-type ion transporter activity IEP Enrichment
MF GO:0016887 ATPase IEP Enrichment
MF GO:0019829 ATPase-coupled cation transmembrane transporter activity IEP Enrichment
MF GO:0140097 catalytic activity, acting on DNA IEP Enrichment
MF GO:0140358 P-type transmembrane transporter activity IEP Enrichment
InterPro domains Description Start Stop
IPR013249 RNA_pol_sigma70_r4_t2 79 131
UniProtKB U3X1V8