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  5. CCL20561

CCL20561 (tuf, BN171_70001)


Aliases : tuf, BN171_70001

Description : Elongation factor EFTu/EF1A [Ensembl]. Elongation factor Tu domain 2, Elongation factor Tu C-terminal domain, Elongation factor Tu GTP binding domain [Interproscan].


Gene families : OG_02_0000191 (OrthoFinder) Phylogenetic Tree(s): OG0000191_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CCL20561
Cluster HCCA: Cluster_2

Target Alias Description ECC score Gene Family Method Actions
AAC76954 tufB, b3980 translation elongation factor EF-Tu 2 [Ensembl].... 0.1 OrthoFinder
AAL22974 STM4146, tufB protein chain elongation factor EF-Tu [Ensembl].... 0.2 OrthoFinder
AEA92834 tuf, OG1RF_10147 elongation factor EF1A [Ensembl]. Elongation factor Tu... 0.07 OrthoFinder
AGT26524 N559_4940 elongation factor Tu [Ensembl]. Elongation factor Tu GTP... 0.06 OrthoFinder
AHY39723 CJ8421_02350 elongation factor Tu [Ensembl]. Elongation factor Tu... 0.18 OrthoFinder
AKI50588 tufA, L2625_02798 translation elongation factor Tu [Ensembl]. Translation... 0.15 OrthoFinder
CBI65842 tuf, HPB8_285 elongation factor EF-Tu [Ensembl]. Elongation factor Tu... 0.05 OrthoFinder
CCP43428 tuf, Rv0685 Probable iron-regulated elongation factor TU Tuf (EF-TU)... 0.16 OrthoFinder
CPC57042 tufA, ERS093114_00830 elongation factor Tu [Ensembl]. Elongation factor Tu... 0.16 OrthoFinder
CRO73354 tuf1_1 Elongation factor Tu [Ensembl]. Elongation factor Tu... 0.06 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003735 structural constituent of ribosome IEP Enrichment
MF GO:0003743 translation initiation factor activity IEP Enrichment
MF GO:0004521 endoribonuclease activity IEP Enrichment
MF GO:0004525 ribonuclease III activity IEP Enrichment
MF GO:0005198 structural molecule activity IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
CC GO:0005840 ribosome IEP Enrichment
BP GO:0006412 translation IEP Enrichment
BP GO:0006518 peptide metabolic process IEP Enrichment
BP GO:0015833 peptide transport IEP Enrichment
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP Enrichment
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Enrichment
MF GO:0019843 rRNA binding IEP Enrichment
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP Enrichment
BP GO:0034645 cellular macromolecule biosynthetic process IEP Enrichment
BP GO:0042886 amide transport IEP Enrichment
BP GO:0043043 peptide biosynthetic process IEP Enrichment
CC GO:0043226 organelle IEP Enrichment
CC GO:0043228 non-membrane-bounded organelle IEP Enrichment
CC GO:0043229 intracellular organelle IEP Enrichment
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Enrichment
BP GO:0043603 cellular amide metabolic process IEP Enrichment
BP GO:0043604 amide biosynthetic process IEP Enrichment
BP GO:0044267 cellular protein metabolic process IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
InterPro domains Description Start Stop
IPR000795 T_Tr_GTP-bd_dom 10 203
IPR004161 EFTu-like_2 227 296
IPR004160 Transl_elong_EFTu/EF1A_C 301 395
UniProtKB U3X2J2