CRN86529 (araG)

Aliases : araG

Description : Arabinose import ATP-binding protein AraG [Ensembl]. ABC transporter [Interproscan].

Gene families : OG_02_0000062 (OrthoFinder) Phylogenetic Tree(s): OG0000062_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: CRN86529
Cluster HCCA: Cluster_24

Target Alias Description ECC score Gene Family Method Actions
AAC74586 lsrA, b1513 autoinducer 2 import ATP-binding protein [Ensembl]. ABC... 0.03 OrthoFinder
AAC75210 mglA, b2149 methyl-galactoside ABC transporter ATPase [Ensembl]. ABC... 0.07 OrthoFinder
AAC76591 xylG, b3567 D-xylose ABC transporter dual domain ATPase [Ensembl].... 0.04 OrthoFinder
AAC76772 rbsA, b3749 D-ribose ABC transporter ATPase [Ensembl]. ABC... 0.07 OrthoFinder
AAC77048 alsA, b4087 D-allose ABC transporter ATPase [Ensembl]. ABC... 0.05 OrthoFinder
AAL22740 STM3882, rbsA D-ribose high-affinity transport protein [Ensembl]. ABC... 0.08 OrthoFinder
AAT48244 ytfR, b4485 putative sugar ABC transporter ATPase [Ensembl]. ABC... 0.03 OrthoFinder
AGT22040 N559_0218 xylose transporter ATP-binding subunit [Ensembl]. 0.03 OrthoFinder
AGT22460 N559_0664 putative ABC transport system ATP-binding component [Ensembl]. 0.03 OrthoFinder
AGT23413 N559_1669 galactose/methyl galaxtoside transporter ATP-binding... 0.09 OrthoFinder
AGT23597 N559_1864 L-arabinose transporter ATP-binding protein [Ensembl]. 0.03 OrthoFinder
AGT25370 N559_3732 putative ribose ABC transport system ATP-binding... 0.07 OrthoFinder
AGT25474 N559_3838 putative ABC transporter [Ensembl]. 0.05 OrthoFinder
AGT26395 N559_4805 putative ABC transporter [Ensembl]. 0.03 OrthoFinder
AGT26698 N559_5124 D-ribose transporter ATP binding protein [Ensembl]. 0.08 OrthoFinder
CCL17791 BN171_1800014 ABC-type transport system, sugar-family ATP-binding... 0.03 OrthoFinder
CCL18507 rbsA, BN171_240012 ABC-type transport system, ribose-specific ATP-binding... 0.04 OrthoFinder
EDJ91404 CGSHi22421_04853 fused methyl-galactoside transporter subunit of ABC... 0.04 OrthoFinder
EDJ91908 CGSHi22421_09133 D-xylose ABC transporter ATP-binding protein [Ensembl].... 0.02 OrthoFinder
KNA60663 VCV51_032102 ribose ABC transporter ATP-binding protein [Ensembl].... 0.06 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
MF GO:0016887 ATPase IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0003860 3-hydroxyisobutyryl-CoA hydrolase activity IEP Enrichment
MF GO:0004356 glutamate-ammonia ligase activity IEP Enrichment
MF GO:0005539 glycosaminoglycan binding IEP Enrichment
MF GO:0008410 CoA-transferase activity IEP Enrichment
MF GO:0016211 ammonia ligase activity IEP Enrichment
MF GO:0016289 CoA hydrolase activity IEP Enrichment
MF GO:0016740 transferase activity IEP Enrichment
MF GO:0016782 transferase activity, transferring sulphur-containing groups IEP Enrichment
MF GO:0016790 thiolester hydrolase activity IEP Enrichment
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP Enrichment
MF GO:0042834 peptidoglycan binding IEP Enrichment
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like_ATP-bd 24 173
IPR003439 ABC_transporter-like_ATP-bd 273 428