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  5. CRN98652

CRN98652 (pfeS_2)


Aliases : pfeS_2

Description : Sensor protein PfeS [Ensembl]. HAMP domain, Histidine kinase-, His Kinase A (phospho-acceptor) domain, Sensor domain of 2-component histidine kinase [Interproscan].


Gene families : OG_02_0000000 (OrthoFinder) Phylogenetic Tree(s): OG0000000_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CRN98652
Cluster HCCA: Cluster_18

Target Alias Description ECC score Gene Family Method Actions
AAC74681 rstB, b1609 sensory histidine kinase of RstAB two-component system... 0.04 OrthoFinder
AAC76062 qseC, b3026 quorum sensing sensory histidine kinase in two-component... 0.05 OrthoFinder
AAC77073 basS, b4112 sensory histidine kinase in two-component regulatory... 0.04 OrthoFinder
AAK98881 spr0077, hk08 Histidine kinase [Ensembl]. HAMP domain, Histidine... 0.03 OrthoFinder
AAK99909 spr1106, hk02 Histidine kinase [Ensembl]. PAS fold, Histidine kinase-,... 0.02 OrthoFinder
AAL22363 STM3501, envZ sensory histidine kinase in two-component regulatory... 0.04 OrthoFinder
AAL22898 STM4058, cpxA sensory kinase in two-component regulatory system with... 0.03 OrthoFinder
AEA94849 vanS, OG1RF_12162 sensor histidine kinase VanS [Ensembl]. Histidine... 0.02 OrthoFinder
AGT26861 N559_5287, PcoS copper resistant sensor kinase PcoS [Ensembl]. His... 0.05 OrthoFinder
AGT26876 N559_5302, CusS sensor kinase CusS [Ensembl]. HAMP domain, His Kinase A... 0.04 OrthoFinder
CCL19031 BN171_2820001 Two-component sensor histidine kinase [Ensembl]. His... 0.02 OrthoFinder
CPC31457 arlS, ERS093114_00003 Two component system histidine kinase ArlS [Ensembl].... 0.04 OrthoFinder
CPC70255 walK, ERS093114_01105 two-component sensor histidine kinase [Ensembl]. PAS... 0.04 OrthoFinder
CPD21743 hssS, ERS093114_02322 Sensor histidine kinase colocalized with HrtAB... 0.02 OrthoFinder
CRO38250 rstB_1 Sensor protein RstB [Ensembl]. HAMP domain, Histidine... 0.04 OrthoFinder
CRO52522 czcS_1 Sensor protein CzcS precursor [Ensembl]. HAMP domain,... 0.05 OrthoFinder
CRP19010 pfeS_3 Sensor protein PfeS [Ensembl]. HAMP domain, Histidine... 0.04 OrthoFinder
CRP43508 qseC_2 Sensor protein QseC [Ensembl]. Histidine kinase-, His... 0.08 OrthoFinder
CRP58291 czcS_3 Sensor protein CzcS precursor [Ensembl]. HAMP domain,... 0.05 OrthoFinder
EDJ90311 CGSHi22421_02246 sensor protein QseC [Ensembl]. Histidine kinase-,... 0.05 OrthoFinder
KNA61031 VCV51_032006 hsp90-like protein [Ensembl]. Histidine kinase-, His... 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEA Interproscan
BP GO:0007165 signal transduction IEA Interproscan
CC GO:0016021 integral component of membrane IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003677 DNA binding IEP Enrichment
MF GO:0003700 DNA-binding transcription factor activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005507 copper ion binding IEP Enrichment
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006352 DNA-templated transcription, initiation IEP Enrichment
BP GO:0006355 regulation of transcription, DNA-templated IEP Enrichment
BP GO:0006725 cellular aromatic compound metabolic process IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
BP GO:0006826 iron ion transport IEP Enrichment
BP GO:0009058 biosynthetic process IEP Enrichment
BP GO:0009059 macromolecule biosynthetic process IEP Enrichment
BP GO:0009889 regulation of biosynthetic process IEP Enrichment
BP GO:0010468 regulation of gene expression IEP Enrichment
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
MF GO:0016987 sigma factor activity IEP Enrichment
BP GO:0018130 heterocycle biosynthetic process IEP Enrichment
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0019222 regulation of metabolic process IEP Enrichment
BP GO:0019438 aromatic compound biosynthetic process IEP Enrichment
MF GO:0030976 thiamine pyrophosphate binding IEP Enrichment
BP GO:0031323 regulation of cellular metabolic process IEP Enrichment
BP GO:0031326 regulation of cellular biosynthetic process IEP Enrichment
BP GO:0032774 RNA biosynthetic process IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
BP GO:0044238 primary metabolic process IEP Enrichment
BP GO:0044249 cellular biosynthetic process IEP Enrichment
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Enrichment
BP GO:0046483 heterocycle metabolic process IEP Enrichment
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Enrichment
BP GO:0051252 regulation of RNA metabolic process IEP Enrichment
BP GO:0060255 regulation of macromolecule metabolic process IEP Enrichment
BP GO:0080090 regulation of primary metabolic process IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0140110 transcription regulator activity IEP Enrichment
BP GO:1901360 organic cyclic compound metabolic process IEP Enrichment
BP GO:1901362 organic cyclic compound biosynthetic process IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
BP GO:1901576 organic substance biosynthetic process IEP Enrichment
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Enrichment
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Enrichment
BP GO:2001141 regulation of RNA biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR031930 HK_sensor 38 148
IPR003661 HisK_dim/P 235 292
IPR003660 HAMP_dom 174 229
IPR003594 HATPase_C 342 444
Locus_tag PAERUG_E11_London_26_VIM_2_06_13_01188