AEA92696 (rpsR, OG1RF_10009)

Aliases : rpsR, OG1RF_10009

Description : 30S ribosomal protein S18 [Ensembl]. Ribosomal protein S18 [Interproscan].

Gene families : OG_02_0000330 (OrthoFinder) Phylogenetic Tree(s): OG0000330_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AEA92696
Cluster	HCCA: Cluster_12

Target	Alias	Description	ECC score	Gene Family Method
AAC77159	rpsR, b4202	30S ribosomal subunit protein S18 [Ensembl]. Ribosomal...	0.25	OrthoFinder
AAL00198	spr1394, rpsR	30S Ribosomal protein S18 [Ensembl]. Ribosomal protein...	0.09	OrthoFinder
AAL23213	STM4393, rpsR	30S ribosomal subunit protein S18 [Ensembl]. Ribosomal...	0.21	OrthoFinder
ADK87142	rpsR, MPNE_0262	ribosomal protein S18 [Ensembl]. Ribosomal protein S18...	0.09	OrthoFinder
AGT26291	N559_4699	30S ribosomal protein S18 [Ensembl].	0.11	OrthoFinder
AHY40278	rpsR, CJ8421_05330	30S ribosomal protein S18 [Ensembl]. Ribosomal protein...	0.06	OrthoFinder
AKI48022	rpsR, L2625_00047	ribosomal protein S18 [Ensembl]. Ribosomal protein S18...	0.29	OrthoFinder
AKP14205	rpsR, WX61_00116	30S ribosomal protein S18 [Ensembl]. Ribosomal protein...	0.03	OrthoFinder
CBI65793	rpsR, HPB8_236	small subunit ribosomal protein S18 [Ensembl]. Ribosomal...	0.03	OrthoFinder
CCG26822	No alias	SSU ribosomal protein S18p @ SSU ribosomal protein S18p,...	0.09	OrthoFinder
CCP42777	rpsR1, Rv0055	30S ribosomal protein S18-1 RpsR1 [Ensembl]. Ribosomal...	0.04	OrthoFinder
CPC89687	rpsR, ERS093114_01560	30S ribosomalprotein S18p [Ensembl]. Ribosomal protein...	0.26	OrthoFinder
CRO53994	rpsR	30S ribosomal protein S18 [Ensembl]. Ribosomal protein...	0.09	OrthoFinder
EDJ91446	rpsR, CGSHi22421_06742	30S ribosomal protein S18 [Ensembl]. Ribosomal protein...	0.16	OrthoFinder
KNA49061	VCV51_033836	ribosomal protein S18 [Ensembl]. Ribosomal protein S18...	0.12	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	cellular amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0000413	protein peptidyl-prolyl isomerization	IEP	Enrichment
MF	GO:0003676	nucleic acid binding	IEP	Enrichment
MF	GO:0003723	RNA binding	IEP	Enrichment
MF	GO:0003746	translation elongation factor activity	IEP	Enrichment
MF	GO:0004017	adenylate kinase activity	IEP	Enrichment
BP	GO:0006414	translational elongation	IEP	Enrichment
MF	GO:0008135	translation factor activity, RNA binding	IEP	Enrichment
MF	GO:0008320	protein transmembrane transporter activity	IEP	Enrichment
BP	GO:0009306	protein secretion	IEP	Enrichment
MF	GO:0015399	primary active transmembrane transporter activity	IEP	Enrichment
MF	GO:0015450	P-P-bond-hydrolysis-driven protein transmembrane transporter activity	IEP	Enrichment
MF	GO:0016776	phosphotransferase activity, phosphate group as acceptor	IEP	Enrichment
BP	GO:0018193	peptidyl-amino acid modification	IEP	Enrichment
BP	GO:0018208	peptidyl-proline modification	IEP	Enrichment
MF	GO:0019843	rRNA binding	IEP	Enrichment
MF	GO:0022884	macromolecule transmembrane transporter activity	IEP	Enrichment
BP	GO:0032940	secretion by cell	IEP	Enrichment
BP	GO:0035592	establishment of protein localization to extracellular region	IEP	Enrichment
MF	GO:0045182	translation regulator activity	IEP	Enrichment
BP	GO:0046903	secretion	IEP	Enrichment
MF	GO:0050145	nucleoside monophosphate kinase activity	IEP	Enrichment
BP	GO:0071692	protein localization to extracellular region	IEP	Enrichment
MF	GO:0090079	translation regulator activity, nucleic acid binding	IEP	Enrichment
MF	GO:0097159	organic cyclic compound binding	IEP	Enrichment
MF	GO:0140318	protein transporter activity	IEP	Enrichment
BP	GO:0140352	export from cell	IEP	Enrichment
MF	GO:1901363	heterocyclic compound binding	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR001648	Ribosomal_S18	22	72

External Links

No external refs found!

AEA92696 (rpsR, OG1RF_10009)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation