CRO49991 (selB)

Aliases : selB

Description : SelB translation factor [Ensembl]. Elongation factor SelB, Elongation factor Tu GTP binding domain [Interproscan].

Gene families : OG_02_0001493 (OrthoFinder) Phylogenetic Tree(s): OG0001493_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: CRO49991
Cluster HCCA: Cluster_16

Target Alias Description ECC score Gene Family Method Actions
AAC76614 selB, b3590 selenocysteinyl-tRNA-specific translation factor... 0.04 OrthoFinder
AHY40574 CJ8421_06930 putative selenocysteine-specific elongation factor... 0.02 OrthoFinder
EDJ90361 CGSHi22421_09945 selenocysteine-specific elongation factor [Ensembl].... 0.02 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0001514 selenocysteine incorporation IEA Interproscan
MF GO:0003723 RNA binding IEA Interproscan
MF GO:0003746 translation elongation factor activity IEA Interproscan
MF GO:0003924 GTPase activity IEA Interproscan
MF GO:0005525 GTP binding IEA Interproscan
CC GO:0005737 cytoplasm IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
BP GO:0007165 signal transduction IEP Enrichment
MF GO:0008134 transcription factor binding IEP Enrichment
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP Enrichment
BP GO:0035556 intracellular signal transduction IEP Enrichment
MF GO:0043565 sequence-specific DNA binding IEP Enrichment
MF GO:0070403 NAD+ binding IEP Enrichment
InterPro domains Description Start Stop
IPR000795 T_Tr_GTP-bd_dom 1 94
IPR015191 Elong_fac_SelB-wing-hlx_typ-3 516 558
IPR015190 Elong_fac_SelB-wing-hlx_typ-2 375 430