CRP21385 (recB)

Aliases : recB

Description : Exodeoxyribonuclease V beta chain [Ensembl]. PD-(D/E)XK nuclease superfamily, UvrD/REP helicase N-terminal domain, UvrD-like helicase C-terminal domain [Interproscan].

Gene families : OG_02_0001431 (OrthoFinder) Phylogenetic Tree(s): OG0001431_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: CRP21385
Cluster	HCCA: Cluster_16

Target	Alias	Description	ECC score	Gene Family Method
AAC75859	recB, b2820	exonuclease V (RecBCD complex), beta subunit [Ensembl]....	0.04	OrthoFinder
AAL21870	STM2994, recB	exonuclease V, beta chain [Ensembl]. UvrD/REP helicase...	0.01	OrthoFinder
AGT22795	N559_1009	exonuclease V subunit beta [Ensembl]. UvrD/REP helicase...	0.01	OrthoFinder
CCP43371	recB, Rv0630c	Probable exonuclease V (beta chain) RecB...	0.03	OrthoFinder
EDJ91134	CGSHi22421_10347	exodeoxyribonuclease V beta chain [Ensembl]. PD-(D/E)XK...	0.01	OrthoFinder
KNA52720	VCV51_031553	exodeoxyribonuclease V, beta chain [Ensembl]. PD-(D/E)XK...	0.02	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0016787	hydrolase activity	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0001514	selenocysteine incorporation	IEP	Enrichment
MF	GO:0003723	RNA binding	IEP	Enrichment
MF	GO:0003746	translation elongation factor activity	IEP	Enrichment
MF	GO:0003924	GTPase activity	IEP	Enrichment
MF	GO:0005525	GTP binding	IEP	Enrichment
CC	GO:0005737	cytoplasm	IEP	Enrichment
BP	GO:0006414	translational elongation	IEP	Enrichment
BP	GO:0006417	regulation of translation	IEP	Enrichment
BP	GO:0006451	translational readthrough	IEP	Enrichment
BP	GO:0006935	chemotaxis	IEP	Enrichment
MF	GO:0008135	translation factor activity, RNA binding	IEP	Enrichment
BP	GO:0010608	posttranscriptional regulation of gene expression	IEP	Enrichment
MF	GO:0016462	pyrophosphatase activity	IEP	Enrichment
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	IEP	Enrichment
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	IEP	Enrichment
MF	GO:0017111	nucleoside-triphosphatase activity	IEP	Enrichment
MF	GO:0019001	guanyl nucleotide binding	IEP	Enrichment
BP	GO:0032268	regulation of cellular protein metabolic process	IEP	Enrichment
MF	GO:0032561	guanyl ribonucleotide binding	IEP	Enrichment
BP	GO:0034248	regulation of cellular amide metabolic process	IEP	Enrichment
BP	GO:0040011	locomotion	IEP	Enrichment
BP	GO:0042330	taxis	IEP	Enrichment
MF	GO:0045182	translation regulator activity	IEP	Enrichment
BP	GO:0051246	regulation of protein metabolic process	IEP	Enrichment
MF	GO:0090079	translation regulator activity, nucleic acid binding	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR014017	DNA_helicase_UvrD-like_C	722	859
IPR038726	PDDEXK_AddAB-type	1011	1214

External Links

Locus_tag	PAERUG_E11_London_26_VIM_2_06_13_04738

CRP21385 (recB)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation