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  5. CRP49296

CRP49296 (artJ)


Aliases : artJ

Description : ABC transporter arginine-binding protein 1 precursor [Ensembl]. Bacterial extracellular solute-binding proteins [Interproscan].


Gene families : OG_02_0000028 (OrthoFinder) Phylogenetic Tree(s): OG0000028_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CRP49296
Cluster HCCA: Cluster_47

Target Alias Description ECC score Gene Family Method Actions
AAC73898 glnH, b0811 glutamine transporter subunit [Ensembl]. Bacterial... 0.09 OrthoFinder
AAC75369 hisJ, b2309 histidine ABC transporter periplasmic binding protein... 0.11 OrthoFinder
AAC75370 argT, b2310 lysine/arginine/ornithine transporter subunit [Ensembl].... 0.09 OrthoFinder
AAL00157 spr1353, glnH ABC transporter substrate-binding protein-glutamine... 0.02 OrthoFinder
AAL19766 STM0830, glnH glutamine high-affinity transporter [Ensembl]. Bacterial... 0.05 OrthoFinder
AAL19822 STM0887, artJ arginine 3rd transport system [Ensembl]. Bacterial... 0.03 OrthoFinder
AAL19825 STM0890, artI arginine transport system [Ensembl]. Bacterial... 0.03 OrthoFinder
AAL21255 STM2354, hisJ histidine transport protein [Ensembl]. Bacterial... 0.07 OrthoFinder
AAL21256 STM2355, argT lysine/arginine/ornithine transport protein [Ensembl].... 0.1 OrthoFinder
AGT23304 N559_1552 lysine-arginine-ornithine-binding periplasmic protein... 0.06 OrthoFinder
AGT23305 N559_1553 histidine ABC transporter periplasmic substrate-binding... 0.07 OrthoFinder
AGT23574 N559_1841 cystine transporter subunit [Ensembl]. Solute-binding... 0.04 OrthoFinder
AGT23903 N559_2191 amino acid ABC transport system periplasmic binding... 0.04 OrthoFinder
AGT25040 N559_3387 arginine 3rd transport system periplasmic binding... 0.04 OrthoFinder
AGT25453 N559_3817 amino acid ABC transporter periplasmic amino... 0.04 OrthoFinder
CCG26201 No alias Cysteine ABC transporter, substrate-binding protein... 0.03 OrthoFinder
CCG26409 No alias Amino acid ABC transporter, amino acid-binding protein... 0.02 OrthoFinder
CCL18562 BN171_2440003 ABC-type transport system,cystine/aminoacid-family... 0.03 OrthoFinder
CCL18566 BN171_2440007 ABC-type transport system,cystine/aminoacid-family... 0.04 OrthoFinder
CRO48561 hisJ Histidine-binding periplasmic protein precursor... 0.04 OrthoFinder
EDJ91875 CGSHi22421_08968 CTP synthetase [Ensembl]. Bacterial extracellular... 0.03 OrthoFinder
KNA58916 VCV51_031259 lysine-arginine-ornithine-binding periplasmic protein... 0.07 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP Enrichment
MF GO:0000166 nucleotide binding IEP Enrichment
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0004356 glutamate-ammonia ligase activity IEP Enrichment
MF GO:0004474 malate synthase activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
BP GO:0006066 alcohol metabolic process IEP Enrichment
BP GO:0006081 cellular aldehyde metabolic process IEP Enrichment
BP GO:0006082 organic acid metabolic process IEP Enrichment
BP GO:0006097 glyoxylate cycle IEP Enrichment
BP GO:0006520 cellular amino acid metabolic process IEP Enrichment
BP GO:0006525 arginine metabolic process IEP Enrichment
BP GO:0006527 arginine catabolic process IEP Enrichment
BP GO:0006729 tetrahydrobiopterin biosynthetic process IEP Enrichment
MF GO:0008124 4-alpha-hydroxytetrahydrobiopterin dehydratase activity IEP Enrichment
MF GO:0008289 lipid binding IEP Enrichment
MF GO:0008410 CoA-transferase activity IEP Enrichment
MF GO:0008483 transaminase activity IEP Enrichment
MF GO:0008791 arginine N-succinyltransferase activity IEP Enrichment
MF GO:0008851 ethanolamine ammonia-lyase activity IEP Enrichment
MF GO:0009015 N-succinylarginine dihydrolase activity IEP Enrichment
BP GO:0009063 cellular amino acid catabolic process IEP Enrichment
BP GO:0009064 glutamine family amino acid metabolic process IEP Enrichment
BP GO:0009065 glutamine family amino acid catabolic process IEP Enrichment
BP GO:0016054 organic acid catabolic process IEP Enrichment
MF GO:0016211 ammonia ligase activity IEP Enrichment
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP Enrichment
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Enrichment
MF GO:0016740 transferase activity IEP Enrichment
MF GO:0016746 acyltransferase activity IEP Enrichment
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP Enrichment
MF GO:0016748 succinyltransferase activity IEP Enrichment
MF GO:0016749 N-succinyltransferase activity IEP Enrichment
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Enrichment
MF GO:0016782 transferase activity, transferring sulphur-containing groups IEP Enrichment
MF GO:0016813 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines IEP Enrichment
MF GO:0016829 lyase activity IEP Enrichment
MF GO:0016841 ammonia-lyase activity IEP Enrichment
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP Enrichment
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP Enrichment
MF GO:0016887 ATPase IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
BP GO:0019751 polyol metabolic process IEP Enrichment
BP GO:0019752 carboxylic acid metabolic process IEP Enrichment
MF GO:0019842 vitamin binding IEP Enrichment
MF GO:0030170 pyridoxal phosphate binding IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
BP GO:0034311 diol metabolic process IEP Enrichment
BP GO:0034312 diol biosynthetic process IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
BP GO:0042559 pteridine-containing compound biosynthetic process IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
BP GO:0043436 oxoacid metabolic process IEP Enrichment
BP GO:0044248 cellular catabolic process IEP Enrichment
BP GO:0044281 small molecule metabolic process IEP Enrichment
BP GO:0044282 small molecule catabolic process IEP Enrichment
BP GO:0046146 tetrahydrobiopterin metabolic process IEP Enrichment
BP GO:0046165 alcohol biosynthetic process IEP Enrichment
BP GO:0046173 polyol biosynthetic process IEP Enrichment
BP GO:0046395 carboxylic acid catabolic process IEP Enrichment
BP GO:0046487 glyoxylate metabolic process IEP Enrichment
MF GO:0046912 acyltransferase, acyl groups converted into alkyl on transfer IEP Enrichment
MF GO:0050660 flavin adenine dinucleotide binding IEP Enrichment
MF GO:0070279 vitamin B6 binding IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
BP GO:1901565 organonitrogen compound catabolic process IEP Enrichment
BP GO:1901605 alpha-amino acid metabolic process IEP Enrichment
BP GO:1901606 alpha-amino acid catabolic process IEP Enrichment
BP GO:1901617 organic hydroxy compound biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR001638 Solute-binding_3/MltF_N 27 245
Locus_tag PAERUG_E11_London_26_VIM_2_06_13_05575