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  5. AEA94769

AEA94769 (rplA, OG1RF_12082)


Aliases : rplA, OG1RF_12082

Description : 50S ribosomal protein L1 [Ensembl]. Ribosomal protein L1p/L10e family [Interproscan].


Gene families : OG_02_0000440 (OrthoFinder) Phylogenetic Tree(s): OG0000440_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AEA94769
Cluster HCCA: Cluster_12

Target Alias Description ECC score Gene Family Method Actions
AAC76958 rplA, b3984 50S ribosomal subunit protein L1 [Ensembl]. Ribosomal... 0.22 OrthoFinder
AAK99360 spr0556, rplA 50S Ribosomal protein L1 [Ensembl]. Ribosomal protein... 0.17 OrthoFinder
AAL22978 STM4150, rplA 50S ribosomal subunit protein L1 [Ensembl]. Ribosomal... 0.19 OrthoFinder
ADK86720 rplA, MPNE_0252 ribosomal protein L1 [Ensembl]. Ribosomal protein... 0.09 OrthoFinder
AGT26520 N559_4936 50S ribosomal protein L1 [Ensembl]. Ribosomal protein... 0.15 OrthoFinder
AHY39728 rplA, CJ8421_02375 50S ribosomal protein L1 [Ensembl]. Ribosomal protein... 0.16 OrthoFinder
AKI48216 rplA, L2625_00266 ribosomal protein L1 [Ensembl]. Ribosomal protein... 0.11 OrthoFinder
AKP15108 rplA, WX61_01054 50S ribosomal protein L1 [Ensembl]. Ribosomal protein... 0.09 OrthoFinder
CCG26742 L10Ae LSU ribosomal protein L1p (L10Ae) [Ensembl]. Ribosomal... 0.16 OrthoFinder
CCL20640 rplA, BN171_80005 50S ribosomal protein L1 [Ensembl]. Ribosomal protein... 0.12 OrthoFinder
CCP43384 rplA, Rv0641 50S ribosomal protein L1 RplA [Ensembl]. Ribosomal... 0.02 OrthoFinder
CPC57393 rplA, ERS093114_00841 50S ribosomal protein L1 [Ensembl]. Ribosomal protein... 0.3 OrthoFinder
CRO73477 rplA 50S ribosomal protein L1 [Ensembl]. Ribosomal protein... 0.15 OrthoFinder
EDJ91478 rplK, CGSHi22421_06902 50S ribosomal protein L11 [Ensembl]. Ribosomal protein... 0.12 OrthoFinder
KNA49131 VCV51_033811 ribosomal protein L1 [Ensembl]. Ribosomal protein... 0.14 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003735 structural constituent of ribosome IEP Enrichment
MF GO:0003746 translation elongation factor activity IEP Enrichment
MF GO:0003924 GTPase activity IEP Enrichment
MF GO:0004017 adenylate kinase activity IEP Enrichment
MF GO:0005198 structural molecule activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005525 GTP binding IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
CC GO:0005840 ribosome IEP Enrichment
BP GO:0006412 translation IEP Enrichment
BP GO:0006414 translational elongation IEP Enrichment
BP GO:0006518 peptide metabolic process IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
MF GO:0008135 translation factor activity, RNA binding IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
MF GO:0008320 protein transmembrane transporter activity IEP Enrichment
BP GO:0009058 biosynthetic process IEP Enrichment
BP GO:0009059 macromolecule biosynthetic process IEP Enrichment
BP GO:0009306 protein secretion IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
MF GO:0015399 primary active transmembrane transporter activity IEP Enrichment
MF GO:0015450 P-P-bond-hydrolysis-driven protein transmembrane transporter activity IEP Enrichment
MF GO:0016462 pyrophosphatase activity IEP Enrichment
MF GO:0017111 nucleoside-triphosphatase activity IEP Enrichment
MF GO:0019001 guanyl nucleotide binding IEP Enrichment
BP GO:0019538 protein metabolic process IEP Enrichment
MF GO:0019843 rRNA binding IEP Enrichment
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Enrichment
MF GO:0022884 macromolecule transmembrane transporter activity IEP Enrichment
MF GO:0032561 guanyl ribonucleotide binding IEP Enrichment
BP GO:0032940 secretion by cell IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
BP GO:0034645 cellular macromolecule biosynthetic process IEP Enrichment
BP GO:0035592 establishment of protein localization to extracellular region IEP Enrichment
BP GO:0042254 ribosome biogenesis IEP Enrichment
BP GO:0043043 peptide biosynthetic process IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
CC GO:0043226 organelle IEP Enrichment
CC GO:0043228 non-membrane-bounded organelle IEP Enrichment
CC GO:0043229 intracellular organelle IEP Enrichment
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Enrichment
BP GO:0043603 cellular amide metabolic process IEP Enrichment
BP GO:0043604 amide biosynthetic process IEP Enrichment
BP GO:0044085 cellular component biogenesis IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
BP GO:0044238 primary metabolic process IEP Enrichment
BP GO:0044249 cellular biosynthetic process IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
BP GO:0044267 cellular protein metabolic process IEP Enrichment
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Enrichment
MF GO:0045182 translation regulator activity IEP Enrichment
BP GO:0046903 secretion IEP Enrichment
BP GO:0071692 protein localization to extracellular region IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
MF GO:0090079 translation regulator activity, nucleic acid binding IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
MF GO:0140318 protein transporter activity IEP Enrichment
BP GO:0140352 export from cell IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
BP GO:1901566 organonitrogen compound biosynthetic process IEP Enrichment
BP GO:1901576 organic substance biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR028364 Ribosomal_L1/biogenesis 35 220
No external refs found!