Coexpression cluster: Cluster_9 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0009235 cobalamin metabolic process 14.86% (11/74) 5.25 0.0 0.0
GO:0009236 cobalamin biosynthetic process 14.86% (11/74) 5.25 0.0 0.0
GO:0033013 tetrapyrrole metabolic process 16.22% (12/74) 4.59 0.0 0.0
GO:0033014 tetrapyrrole biosynthetic process 16.22% (12/74) 4.59 0.0 0.0
GO:0006766 vitamin metabolic process 14.86% (11/74) 4.54 0.0 0.0
GO:0042364 water-soluble vitamin biosynthetic process 14.86% (11/74) 4.54 0.0 0.0
GO:0006767 water-soluble vitamin metabolic process 14.86% (11/74) 4.54 0.0 0.0
GO:0009110 vitamin biosynthetic process 14.86% (11/74) 4.54 0.0 0.0
GO:0019438 aromatic compound biosynthetic process 16.22% (12/74) 2.77 0.0 1e-06
GO:0044283 small molecule biosynthetic process 14.86% (11/74) 2.96 0.0 1e-06
GO:0018130 heterocycle biosynthetic process 16.22% (12/74) 2.65 0.0 4e-06
GO:1901362 organic cyclic compound biosynthetic process 16.22% (12/74) 2.57 0.0 6e-06
GO:0044271 cellular nitrogen compound biosynthetic process 17.57% (13/74) 2.07 8e-06 0.000104
GO:1901566 organonitrogen compound biosynthetic process 17.57% (13/74) 1.94 2e-05 0.000261
GO:0044281 small molecule metabolic process 18.92% (14/74) 1.74 4.4e-05 0.00053
GO:1901564 organonitrogen compound metabolic process 22.97% (17/74) 1.48 6.6e-05 0.000742
GO:0016741 transferase activity, transferring one-carbon groups 9.46% (7/74) 2.6 0.000114 0.001201
GO:0016829 lyase activity 8.11% (6/74) 2.63 0.000326 0.003074
GO:0008168 methyltransferase activity 8.11% (6/74) 2.63 0.000326 0.003074
GO:0044249 cellular biosynthetic process 17.57% (13/74) 1.48 0.000572 0.005119
GO:1901576 organic substance biosynthetic process 17.57% (13/74) 1.44 0.000709 0.005768
GO:0008851 ethanolamine ammonia-lyase activity 2.7% (2/74) 5.25 0.000681 0.005805
GO:0016841 ammonia-lyase activity 2.7% (2/74) 4.67 0.002008 0.014977
GO:0016840 carbon-nitrogen lyase activity 2.7% (2/74) 4.67 0.002008 0.014977
GO:0009058 biosynthetic process 17.57% (13/74) 1.26 0.002352 0.016837
GO:0034641 cellular nitrogen compound metabolic process 18.92% (14/74) 1.18 0.002595 0.017866
GO:0006725 cellular aromatic compound metabolic process 16.22% (12/74) 1.29 0.002938 0.019478
GO:0046483 heterocycle metabolic process 16.22% (12/74) 1.26 0.003506 0.022415
GO:0006807 nitrogen compound metabolic process 22.97% (17/74) 0.98 0.003762 0.022446
GO:0000041 transition metal ion transport 2.7% (2/74) 4.25 0.003948 0.022796
GO:0044237 cellular metabolic process 24.32% (18/74) 0.95 0.003699 0.022834
GO:1901360 organic cyclic compound metabolic process 16.22% (12/74) 1.23 0.004161 0.023276
GO:0009308 amine metabolic process 2.7% (2/74) 3.93 0.006468 0.033079
GO:0044106 cellular amine metabolic process 2.7% (2/74) 3.93 0.006468 0.033079
GO:0006576 cellular biogenic amine metabolic process 2.7% (2/74) 3.93 0.006468 0.033079
GO:0003824 catalytic activity 39.19% (29/74) 0.6 0.007391 0.03675
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Clostridioides difficile HCCA Cluster_6 0.077 OrthoFinder Compare
Clostridioides difficile HCCA Cluster_12 0.049 OrthoFinder Compare
Clostridioides difficile HCCA Cluster_39 0.035 OrthoFinder Compare
Enterococcus faecalis HCCA Cluster_4 0.142 OrthoFinder Compare
Escherichia coli HCCA Cluster_26 0.045 OrthoFinder Compare
Klebsiella pneumoniae HCCA Cluster_3 0.066 OrthoFinder Compare
Klebsiella pneumoniae HCCA Cluster_16 0.06 OrthoFinder Compare
Klebsiella pneumoniae HCCA Cluster_33 0.131 OrthoFinder Compare
Pseudomonas aeruginosa HCCA Cluster_16 0.045 OrthoFinder Compare
Salmonella enterica HCCA Cluster_22 0.365 OrthoFinder Compare
Salmonella enterica HCCA Cluster_38 0.061 OrthoFinder Compare
Sequences (74) (download table)

InterPro Domains

GO Terms

Family Terms