AGT22821 (N559_1040)


Aliases : N559_1040

Description : cobyrinic acid a,c-diamide synthase [Ensembl]. CobQ/CobB/MinD/ParA nucleotide binding domain, CobB/CobQ-like glutamine amidotransferase domain [InterProScan].


Gene families : OG_02_0001824 (OrthoFinder) Phylogenetic Tree(s): OG0001824_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AGT22821
Cluster HCCA: Cluster_50

Target Alias Description ECC score Gene Family Method Actions
AAL20939 STM2035, cbiA synthesis of vitamin B12 adenosyl cobalamide precursor... 0.2 OrthoFinder
AKI49119 cobB, L2625_01208 cobyrinic acid a,c-diamide synthase [Ensembl].... 0.11 OrthoFinder
CCL19882 cobB, BN171_3590003 Cobyrinic acid A,C-diamide synthase [Ensembl].... 0.05 OrthoFinder
CRP60089 cobB_1 Cobyrinic acid A,C-diamide synthase [Ensembl].... 0.04 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
BP GO:0009236 cobalamin biosynthetic process IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP Enrichment
BP GO:0001514 selenocysteine incorporation IEP Enrichment
MF GO:0003746 translation elongation factor activity IEP Enrichment
MF GO:0004371 glycerone kinase activity IEP Enrichment
MF GO:0004619 phosphoglycerate mutase activity IEP Enrichment
MF GO:0004784 superoxide dismutase activity IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
CC GO:0005737 cytoplasm IEP Enrichment
BP GO:0006007 glucose catabolic process IEP Enrichment
BP GO:0006071 glycerol metabolic process IEP Enrichment
BP GO:0006106 fumarate metabolic process IEP Enrichment
BP GO:0006414 translational elongation IEP Enrichment
BP GO:0006417 regulation of translation IEP Enrichment
BP GO:0006451 translational readthrough IEP Enrichment
BP GO:0006508 proteolysis IEP Enrichment
BP GO:0006801 superoxide metabolic process IEP Enrichment
BP GO:0006824 cobalt ion transport IEP Enrichment
BP GO:0006835 dicarboxylic acid transport IEP Enrichment
MF GO:0008168 methyltransferase activity IEP Enrichment
BP GO:0009401 phosphoenolpyruvate-dependent sugar phosphotransferase system IEP Enrichment
BP GO:0010608 posttranscriptional regulation of gene expression IEP Enrichment
MF GO:0015087 cobalt ion transmembrane transporter activity IEP Enrichment
MF GO:0015556 C4-dicarboxylate transmembrane transporter activity IEP Enrichment
BP GO:0015740 C4-dicarboxylate transport IEP Enrichment
CC GO:0016020 membrane IEP Enrichment
CC GO:0016021 integral component of membrane IEP Enrichment
MF GO:0016721 oxidoreductase activity, acting on superoxide radicals as acceptor IEP Enrichment
MF GO:0016740 transferase activity IEP Enrichment
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Enrichment
MF GO:0016852 sirohydrochlorin cobaltochelatase activity IEP Enrichment
MF GO:0016866 intramolecular transferase activity IEP Enrichment
MF GO:0016867 intramolecular transferase activity, transferring acyl groups IEP Enrichment
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP Enrichment
MF GO:0016993 precorrin-8X methylmutase activity IEP Enrichment
BP GO:0019251 anaerobic cobalamin biosynthetic process IEP Enrichment
BP GO:0019320 hexose catabolic process IEP Enrichment
BP GO:0019400 alditol metabolic process IEP Enrichment
BP GO:0019645 anaerobic electron transport chain IEP Enrichment
MF GO:0030145 manganese ion binding IEP Enrichment
CC GO:0031224 intrinsic component of membrane IEP Enrichment
BP GO:0032268 regulation of cellular protein metabolic process IEP Enrichment
BP GO:0034248 regulation of cellular amide metabolic process IEP Enrichment
MF GO:0043752 adenosylcobinamide kinase activity IEP Enrichment
BP GO:0046365 monosaccharide catabolic process IEP Enrichment
MF GO:0048472 threonine-phosphate decarboxylase activity IEP Enrichment
BP GO:0051246 regulation of protein metabolic process IEP Enrichment
BP GO:0072593 reactive oxygen species metabolic process IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
InterPro domains Description Start Stop
IPR002586 CobQ/CobB/MinD/ParA_Nub-bd_dom 8 193
IPR011698 GATase_3 252 443
No external refs found!