1. Home
  2. Species
  3. Klebsiella pneumoniae
  4. Sequence
  5. AGT26585

AGT26585 (N559_5004, RhlB)


Aliases : N559_5004, RhlB

Description : ATP-dependent RNA helicase RhlB [Ensembl]. Helicase conserved C-terminal domain, DEAD/DEAH box helicase domain [InterProScan].


Gene families : OG_02_0000033 (OrthoFinder) Phylogenetic Tree(s): OG0000033_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AGT26585
Cluster HCCA: Cluster_44

Target Alias Description ECC score Gene Family Method Actions
AAC75629 srmB, b2576 ATP-dependent RNA helicase [Ensembl]. DEAD/DEAH box... 0.05 OrthoFinder
AAC76196 deaD, b3162 ATP-dependent RNA helicase [Ensembl]. DEAD/DEAH box... 0.04 OrthoFinder
AAC76785 rhlB, b3780 ATP-dependent RNA helicase [Ensembl]. DEAD/DEAH box... 0.04 OrthoFinder
AAL19757 STM0820, rhlE putative ATP-dependent RNA helicase [Ensembl]. DEAD/DEAH... 0.05 OrthoFinder
AAL21537 STM2643, srmB ATP-dependent RNA helicase [Ensembl]. DEAD/DEAH box... 0.05 OrthoFinder
AAL22152 STM3280, deaD cysteine sulfinate desulfinase [Ensembl]. DEAD/DEAH box... 0.04 OrthoFinder
AAL22764 STM3914, rhlB putative helicase [Ensembl]. DEAD/DEAH box helicase,... 0.07 OrthoFinder
AEA93263 srmB, OG1RF_10576 ATP-dependent RNA helicase DeaD [Ensembl]. DEAD/DEAH box... 0.03 OrthoFinder
AEA93852 OG1RF_11165 DEAD/DEAH box family ATP-dependent RNA helicase... 0.03 OrthoFinder
AKI49240 dbpA, L2625_01332 ATP-dependent RNA helicase [Ensembl]. Helicase,... 0.02 OrthoFinder
AKI49447 L2625_01548 ATP-dependent RNA helicase, putative [Ensembl].... 0.04 OrthoFinder
AKI49716 L2625_01857 ATP-dependent RNA helicase [Ensembl]. DEAD/DEAH box... 0.04 OrthoFinder
AKP15465 rhlE_2, WX61_01419 ATP-dependent RNA helicase RhlE [Ensembl]. DEAD/DEAH box... 0.02 OrthoFinder
CBI66873 deaD, HPB8_1316 putative helicase [Ensembl]. DEAD/DEAH box helicase,... 0.03 OrthoFinder
CCP46027 rhlE, Rv3211 Probable ATP-dependent RNA helicase RhlE [Ensembl].... 0.02 OrthoFinder
CPD23408 ERS093114_02346 ATP-dependent RNA helicase [Ensembl]. DEAD/DEAH box... 0.04 OrthoFinder
CRO01721 rhlB ATP-dependent RNA helicase RhlB [Ensembl]. DEAD/DEAH box... 0.03 OrthoFinder
CRO08405 rhlE_1 ATP-dependent RNA helicase RhlE [Ensembl]. DEAD/DEAH box... 0.03 OrthoFinder
EDJ91575 CGSHi22421_07387 ATP-dependent RNA helicase [Ensembl]. DEAD/DEAH box... 0.04 OrthoFinder
KNA57620 VCV51_030433 DEAD/DEAH box helicase [Ensembl]. DEAD/DEAH box... 0.05 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000902 cell morphogenesis IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003747 translation release factor activity IEP Enrichment
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0003848 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity IEP Enrichment
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Enrichment
MF GO:0004813 alanine-tRNA ligase activity IEP Enrichment
MF GO:0004814 arginine-tRNA ligase activity IEP Enrichment
MF GO:0004820 glycine-tRNA ligase activity IEP Enrichment
MF GO:0005315 inorganic phosphate transmembrane transporter activity IEP Enrichment
MF GO:0005539 glycosaminoglycan binding IEP Enrichment
CC GO:0005737 cytoplasm IEP Enrichment
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006260 DNA replication IEP Enrichment
BP GO:0006353 DNA-templated transcription, termination IEP Enrichment
BP GO:0006396 RNA processing IEP Enrichment
BP GO:0006399 tRNA metabolic process IEP Enrichment
BP GO:0006415 translational termination IEP Enrichment
BP GO:0006418 tRNA aminoacylation for protein translation IEP Enrichment
BP GO:0006419 alanyl-tRNA aminoacylation IEP Enrichment
BP GO:0006420 arginyl-tRNA aminoacylation IEP Enrichment
BP GO:0006426 glycyl-tRNA aminoacylation IEP Enrichment
BP GO:0006520 cellular amino acid metabolic process IEP Enrichment
BP GO:0006643 membrane lipid metabolic process IEP Enrichment
BP GO:0006664 glycolipid metabolic process IEP Enrichment
BP GO:0006725 cellular aromatic compound metabolic process IEP Enrichment
BP GO:0006817 phosphate ion transport IEP Enrichment
MF GO:0008079 translation termination factor activity IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
MF GO:0008171 O-methyltransferase activity IEP Enrichment
MF GO:0008175 tRNA methyltransferase activity IEP Enrichment
MF GO:0008194 UDP-glycosyltransferase activity IEP Enrichment
MF GO:0008915 lipid-A-disaccharide synthase activity IEP Enrichment
MF GO:0009020 tRNA (guanosine-2'-O-)-methyltransferase activity IEP Enrichment
BP GO:0009058 biosynthetic process IEP Enrichment
BP GO:0009245 lipid A biosynthetic process IEP Enrichment
BP GO:0009247 glycolipid biosynthetic process IEP Enrichment
CC GO:0009360 DNA polymerase III complex IEP Enrichment
BP GO:0009396 folic acid-containing compound biosynthetic process IEP Enrichment
BP GO:0009653 anatomical structure morphogenesis IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
MF GO:0016423 tRNA (guanine) methyltransferase activity IEP Enrichment
MF GO:0016740 transferase activity IEP Enrichment
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Enrichment
MF GO:0016757 glycosyltransferase activity IEP Enrichment
MF GO:0016778 diphosphotransferase activity IEP Enrichment
MF GO:0016874 ligase activity IEP Enrichment
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Enrichment
BP GO:0022411 cellular component disassembly IEP Enrichment
BP GO:0032502 developmental process IEP Enrichment
MF GO:0032977 membrane insertase activity IEP Enrichment
BP GO:0032984 protein-containing complex disassembly IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
BP GO:0034660 ncRNA metabolic process IEP Enrichment
BP GO:0042559 pteridine-containing compound biosynthetic process IEP Enrichment
CC GO:0042575 DNA polymerase complex IEP Enrichment
MF GO:0042834 peptidoglycan binding IEP Enrichment
BP GO:0043038 amino acid activation IEP Enrichment
BP GO:0043039 tRNA aminoacylation IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
BP GO:0043624 cellular protein complex disassembly IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
BP GO:0046467 membrane lipid biosynthetic process IEP Enrichment
BP GO:0046483 heterocycle metabolic process IEP Enrichment
BP GO:0046493 lipid A metabolic process IEP Enrichment
BP GO:0051302 regulation of cell division IEP Enrichment
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP Enrichment
MF GO:0062105 RNA 2'-O-methyltransferase activity IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
MF GO:0106050 tRNA 2'-O-methyltransferase activity IEP Enrichment
MF GO:0140098 catalytic activity, acting on RNA IEP Enrichment
MF GO:0140101 catalytic activity, acting on a tRNA IEP Enrichment
MF GO:0140104 molecular carrier activity IEP Enrichment
CC GO:0140535 intracellular protein-containing complex IEP Enrichment
MF GO:0140597 protein carrier activity IEP Enrichment
BP GO:1901269 lipooligosaccharide metabolic process IEP Enrichment
BP GO:1901271 lipooligosaccharide biosynthetic process IEP Enrichment
BP GO:1901360 organic cyclic compound metabolic process IEP Enrichment
CC GO:1990234 transferase complex IEP Enrichment
InterPro domains Description Start Stop
IPR011545 DEAD/DEAH_box_helicase_dom 33 206
IPR001650 Helicase_C 243 351
No external refs found!