AKP14839 (ffh, WX61_00772)


Aliases : ffh, WX61_00772

Description : Signal recognition particle protein [Ensembl]. SRP54-type protein, Signal peptide binding domain [Interproscan].


Gene families : OG_02_0000064 (OrthoFinder) Phylogenetic Tree(s): OG0000064_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AKP14839
Cluster HCCA: Cluster_8

Target Alias Description ECC score Gene Family Method Actions
AAC76489 ftsY, b3464 Signal Recognition Particle (SRP) receptor [Ensembl].... 0.02 OrthoFinder
AAK99926 spr1123, ftsY Cell division protein FtsY [Ensembl]. SRP54-type protein... 0.04 OrthoFinder
AAK99969 spr1166, ffh Signal recognition particle (Fifty four homolog)... 0.04 OrthoFinder
AGT22143 N559_0324, FtsY signal recognition particle-docking protein FtsY... 0.05 OrthoFinder
AGT23083 N559_1321 fifty-four-like protein [Ensembl]. Signal peptide... 0.04 OrthoFinder
AKI49796 ffh, L2625_01943 signal recognition particle protein [Ensembl]. Signal... 0.02 OrthoFinder
AKI49798 ftsY, L2625_01945 cell division ABC transporter, substrate-binding protein... 0.03 OrthoFinder
CPC35939 ffh, ERS093114_00187 Signal recognition particle%2C subunit FFH/SRP54... 0.05 OrthoFinder
CRO16906 ffh p48 [Ensembl]. SRP54-type protein, Signal peptide... 0.05 OrthoFinder
CRP24369 ftsY Signal recognition particle receptor FtsY [Ensembl].... 0.03 OrthoFinder
EDJ90379 CGSHi22421_01517 Signal recognition particle protein [Ensembl].... 0.03 OrthoFinder
EDJ91345 CGSHi22421_04558 cell division protein FtsY [Ensembl]. SRP54-type protein... 0.03 OrthoFinder
KNA51821 VCV51_030372 signal recognition particle protein [Ensembl].... 0.05 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEA Interproscan
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEA Interproscan
MF GO:0008312 7S RNA binding IEA Interproscan
CC GO:0048500 signal recognition particle IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP Enrichment
MF GO:0003677 DNA binding IEP Enrichment
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0003906 DNA-(apurinic or apyrimidinic site) endonuclease activity IEP Enrichment
MF GO:0003916 DNA topoisomerase activity IEP Enrichment
MF GO:0003918 DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity IEP Enrichment
MF GO:0003989 acetyl-CoA carboxylase activity IEP Enrichment
MF GO:0004150 dihydroneopterin aldolase activity IEP Enrichment
MF GO:0004749 ribose phosphate diphosphokinase activity IEP Enrichment
MF GO:0004803 transposase activity IEP Enrichment
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Enrichment
MF GO:0004820 glycine-tRNA ligase activity IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
BP GO:0006082 organic acid metabolic process IEP Enrichment
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006259 DNA metabolic process IEP Enrichment
BP GO:0006265 DNA topological change IEP Enrichment
BP GO:0006289 nucleotide-excision repair IEP Enrichment
BP GO:0006418 tRNA aminoacylation for protein translation IEP Enrichment
BP GO:0006426 glycyl-tRNA aminoacylation IEP Enrichment
BP GO:0006520 cellular amino acid metabolic process IEP Enrichment
BP GO:0006725 cellular aromatic compound metabolic process IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
BP GO:0006996 organelle organization IEP Enrichment
MF GO:0008094 ATPase, acting on DNA IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
MF GO:0008270 zinc ion binding IEP Enrichment
MF GO:0008483 transaminase activity IEP Enrichment
CC GO:0009317 acetyl-CoA carboxylase complex IEP Enrichment
BP GO:0010033 response to organic substance IEP Enrichment
BP GO:0016043 cellular component organization IEP Enrichment
MF GO:0016421 CoA carboxylase activity IEP Enrichment
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Enrichment
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Enrichment
MF GO:0016885 ligase activity, forming carbon-carbon bonds IEP Enrichment
BP GO:0019752 carboxylic acid metabolic process IEP Enrichment
MF GO:0019842 vitamin binding IEP Enrichment
MF GO:0030170 pyridoxal phosphate binding IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
MF GO:0030976 thiamine pyrophosphate binding IEP Enrichment
BP GO:0031554 regulation of DNA-templated transcription, termination IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
BP GO:0034660 ncRNA metabolic process IEP Enrichment
BP GO:0042221 response to chemical IEP Enrichment
BP GO:0042558 pteridine-containing compound metabolic process IEP Enrichment
BP GO:0043038 amino acid activation IEP Enrichment
BP GO:0043039 tRNA aminoacylation IEP Enrichment
MF GO:0043169 cation binding IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
BP GO:0043244 regulation of protein-containing complex disassembly IEP Enrichment
BP GO:0043436 oxoacid metabolic process IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
BP GO:0044238 primary metabolic process IEP Enrichment
BP GO:0044281 small molecule metabolic process IEP Enrichment
BP GO:0046483 heterocycle metabolic process IEP Enrichment
MF GO:0046872 metal ion binding IEP Enrichment
BP GO:0051276 chromosome organization IEP Enrichment
MF GO:0070279 vitamin B6 binding IEP Enrichment
BP GO:0071103 DNA conformation change IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
BP GO:0071840 cellular component organization or biogenesis IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
MF GO:0140097 catalytic activity, acting on DNA IEP Enrichment
BP GO:1901360 organic cyclic compound metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR013822 Signal_recog_particl_SRP54_hlx 5 82
IPR000897 SRP54_GTPase_dom 101 296
IPR004125 Signal_recog_particle_SRP54_M 329 428
No external refs found!