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  5. AAL19774

AAL19774 (STM0838, ybiT)


Aliases : STM0838, ybiT

Description : putative ATPase component of ABC transporter with duplicated ATPase domain [Ensembl]. ABC transporter [Interproscan].


Gene families : OG_02_0000030 (OrthoFinder) Phylogenetic Tree(s): OG0000030_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AAL19774
Cluster HCCA: Cluster_3

Target Alias Description ECC score Gene Family Method Actions
AAC73907 ybiT, b0820 ABC-F family putative regulatory ATPase [Ensembl]. ABC... 0.26 OrthoFinder
AAC74035 uup, b0949 replication regulatory ABC-F family DNA-binding ATPase... 0.16 OrthoFinder
AAC76377 yheS, b3352 ABC-F family protein predicted regulatory ATPase... 0.05 OrthoFinder
AAK99482 spr0678, ABC-NBD ABC transporter ATP-binding protein-unknown substrate... 0.03 OrthoFinder
AAL00216 spr1412, ABC-NBD ABC transporter ATP-binding protein-unknown substrate... 0.03 OrthoFinder
AEA93888 msrA, OG1RF_11201 ABC superfamily ATP binding cassette transporter, ABC... 0.01 OrthoFinder
AEA94698 OG1RF_12011 ABC superfamily ATP binding cassette transporter, ABC... 0.04 OrthoFinder
AGT22228 N559_0416 putative ABC transporter ATP-binding protein [Ensembl].... 0.18 OrthoFinder
AGT24961 N559_3303 ABC transporter ATPase component [Ensembl]. ABC... 0.06 OrthoFinder
AGT25131 N559_3480 putative transport system ATP-binding component... 0.08 OrthoFinder
AHY40102 CJ8421_04395 ABC transporter ATP-binding protein [Ensembl]. ABC... 0.03 OrthoFinder
AKI49428 L2625_01529 ABC transporter, ATP-binding protein [Ensembl]. ABC... 0.06 OrthoFinder
AKI50697 L2625_02912 ABC transporter, ATP-binding protein [Ensembl]. ABC... 0.03 OrthoFinder
AKP14644 yjjK, WX61_00565 putative ABC transporter ATP-binding protein YjjK... 0.05 OrthoFinder
AKP16088 uup_1, WX61_02062 ABC transporter ATP-binding protein uup [Ensembl]. ABC... 0.04 OrthoFinder
AKP16180 uup_2, WX61_02156 ABC transporter ATP-binding protein uup [Ensembl]. ABC... 0.08 OrthoFinder
CCG26162 No alias COG0488: ATPase components of ABC transporters with... 0.09 OrthoFinder
CCG26250 No alias ABC transporter ATP-binding protein [Ensembl]. ABC... 0.03 OrthoFinder
CCG26385 No alias ABC transporter ATP-binding protein uup [Ensembl]. ABC... 0.09 OrthoFinder
CCL16955 BN171_1030005 ABC-type transport system, ATP-binding protein... 0.04 OrthoFinder
CCL18408 BN171_2290013 ABC-type transport system, ATP-binding protein... 0.04 OrthoFinder
CPC31994 yheS_1, ERS093114_00026 ABC transporter ATP-binding protein [Ensembl]. ABC... 0.07 OrthoFinder
CPC50068 yjjK, ERS093114_00633 ABC transporter ATP-binding protein uup [Ensembl]. ABC... 0.04 OrthoFinder
CRN86127 yheS_1 putative ABC transporter ATP-binding protein YheS... 0.07 OrthoFinder
CRO90899 uup ABC transporter ATP-binding protein uup [Ensembl]. ABC... 0.13 OrthoFinder
CRP46393 yheS_2 putative ABC transporter ATP-binding protein YheS... 0.08 OrthoFinder
EDJ91009 CGSHi22421_02766 ABC transporter ATP-binding protein [Ensembl]. ABC... 0.06 OrthoFinder
KNA54963 VCV51_033148 ABC transporter [Ensembl]. ABC transporter [Interproscan]. 0.05 OrthoFinder
KNA55290 VCV51_033103 ABC transporter ATP-binding protein [Ensembl]. ABC... 0.03 OrthoFinder
KNA57470 VCV51_030455 ABC transporter ATP-binding protein [Ensembl]. ABC... 0.05 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
MF GO:0016887 ATPase IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP Enrichment
BP GO:0001522 pseudouridine synthesis IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0003883 CTP synthase activity IEP Enrichment
MF GO:0003916 DNA topoisomerase activity IEP Enrichment
MF GO:0003918 DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity IEP Enrichment
MF GO:0004312 fatty acid synthase activity IEP Enrichment
MF GO:0004315 3-oxoacyl-[acyl-carrier-protein] synthase activity IEP Enrichment
MF GO:0004652 polynucleotide adenylyltransferase activity IEP Enrichment
MF GO:0004810 tRNA adenylyltransferase activity IEP Enrichment
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Enrichment
MF GO:0004814 arginine-tRNA ligase activity IEP Enrichment
MF GO:0005525 GTP binding IEP Enrichment
BP GO:0006066 alcohol metabolic process IEP Enrichment
BP GO:0006082 organic acid metabolic process IEP Enrichment
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006220 pyrimidine nucleotide metabolic process IEP Enrichment
BP GO:0006221 pyrimidine nucleotide biosynthetic process IEP Enrichment
BP GO:0006259 DNA metabolic process IEP Enrichment
BP GO:0006260 DNA replication IEP Enrichment
BP GO:0006265 DNA topological change IEP Enrichment
BP GO:0006281 DNA repair IEP Enrichment
BP GO:0006399 tRNA metabolic process IEP Enrichment
BP GO:0006418 tRNA aminoacylation for protein translation IEP Enrichment
BP GO:0006420 arginyl-tRNA aminoacylation IEP Enrichment
BP GO:0006520 cellular amino acid metabolic process IEP Enrichment
BP GO:0006633 fatty acid biosynthetic process IEP Enrichment
BP GO:0006725 cellular aromatic compound metabolic process IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
BP GO:0006996 organelle organization IEP Enrichment
MF GO:0008094 ATPase, acting on DNA IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
MF GO:0008168 methyltransferase activity IEP Enrichment
BP GO:0009116 nucleoside metabolic process IEP Enrichment
CC GO:0009295 nucleoid IEP Enrichment
CC GO:0009360 DNA polymerase III complex IEP Enrichment
BP GO:0009451 RNA modification IEP Enrichment
MF GO:0009982 pseudouridine synthase activity IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
BP GO:0015969 guanosine tetraphosphate metabolic process IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
MF GO:0016740 transferase activity IEP Enrichment
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Enrichment
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Enrichment
MF GO:0016853 isomerase activity IEP Enrichment
MF GO:0016866 intramolecular transferase activity IEP Enrichment
MF GO:0016874 ligase activity IEP Enrichment
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Enrichment
MF GO:0017150 tRNA dihydrouridine synthase activity IEP Enrichment
MF GO:0019001 guanyl nucleotide binding IEP Enrichment
BP GO:0019637 organophosphate metabolic process IEP Enrichment
BP GO:0019751 polyol metabolic process IEP Enrichment
BP GO:0019752 carboxylic acid metabolic process IEP Enrichment
MF GO:0032561 guanyl ribonucleotide binding IEP Enrichment
BP GO:0034035 purine ribonucleoside bisphosphate metabolic process IEP Enrichment
BP GO:0034470 ncRNA processing IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
BP GO:0034660 ncRNA metabolic process IEP Enrichment
MF GO:0035596 methylthiotransferase activity IEP Enrichment
CC GO:0042575 DNA polymerase complex IEP Enrichment
BP GO:0043038 amino acid activation IEP Enrichment
BP GO:0043039 tRNA aminoacylation IEP Enrichment
MF GO:0043138 3'-5' DNA helicase activity IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
BP GO:0043436 oxoacid metabolic process IEP Enrichment
BP GO:0043647 inositol phosphate metabolic process IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
BP GO:0044238 primary metabolic process IEP Enrichment
BP GO:0044249 cellular biosynthetic process IEP Enrichment
BP GO:0044281 small molecule metabolic process IEP Enrichment
BP GO:0046164 alcohol catabolic process IEP Enrichment
BP GO:0046174 polyol catabolic process IEP Enrichment
BP GO:0046483 heterocycle metabolic process IEP Enrichment
BP GO:0046838 phosphorylated carbohydrate dephosphorylation IEP Enrichment
BP GO:0046855 inositol phosphate dephosphorylation IEP Enrichment
MF GO:0050497 alkylthioltransferase activity IEP Enrichment
BP GO:0051276 chromosome organization IEP Enrichment
MF GO:0051536 iron-sulfur cluster binding IEP Enrichment
MF GO:0051540 metal cluster binding IEP Enrichment
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP Enrichment
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP Enrichment
MF GO:0070402 NADPH binding IEP Enrichment
MF GO:0070566 adenylyltransferase activity IEP Enrichment
BP GO:0071103 DNA conformation change IEP Enrichment
BP GO:0071545 inositol phosphate catabolic process IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
BP GO:0072527 pyrimidine-containing compound metabolic process IEP Enrichment
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
MF GO:0140097 catalytic activity, acting on DNA IEP Enrichment
MF GO:0140098 catalytic activity, acting on RNA IEP Enrichment
MF GO:0140101 catalytic activity, acting on a tRNA IEP Enrichment
BP GO:1901360 organic cyclic compound metabolic process IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
BP GO:1901576 organic substance biosynthetic process IEP Enrichment
BP GO:1901616 organic hydroxy compound catabolic process IEP Enrichment
BP GO:1901657 glycosyl compound metabolic process IEP Enrichment
MF GO:1990817 RNA adenylyltransferase activity IEP Enrichment
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like_ATP-bd 328 459
IPR032781 ABC_tran_Xtn 216 301
IPR003439 ABC_transporter-like_ATP-bd 10 176
No external refs found!