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  5. CCL20577

CCL20577 (rpsH, BN171_70017)


Aliases : rpsH, BN171_70017

Description : 30S ribosomal protein S8 [Ensembl]. Ribosomal protein S8 [Interproscan].


Gene families : OG_02_0000396 (OrthoFinder) Phylogenetic Tree(s): OG0000396_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CCL20577
Cluster HCCA: Cluster_2

Target Alias Description ECC score Gene Family Method Actions
AAC76331 rpsH, b3306 30S ribosomal subunit protein S8 [Ensembl]. Ribosomal... 0.18 OrthoFinder
AAK99007 spr0203, rpsH 30S Ribosomal protein S8 (S8) [Ensembl]. Ribosomal... 0.13 OrthoFinder
AAL22289 STM3426, rpsH 30S ribosomal subunit protein S8, and regulator... 0.24 OrthoFinder
ADK87107 rpsH, MPNE_0208 ribosomal protein S8 [Ensembl]. Ribosomal protein S8... 0.12 OrthoFinder
AEA92852 rpsH, OG1RF_10165 30S ribosomal protein S8 [Ensembl]. Ribosomal protein S8... 0.21 OrthoFinder
AGT22256 N559_0448 30S ribosomal protein S8 [Ensembl]. 0.12 OrthoFinder
AHY40878 rpsH, CJ8421_08530 30S ribosomal protein S8 [Ensembl]. Ribosomal protein S8... 0.22 OrthoFinder
AKI50553 rpsH, L2625_02763 ribosomal protein S8 [Ensembl]. Ribosomal protein S8... 0.17 OrthoFinder
AKP15137 rpsH, WX61_01083 30S ribosomal protein S8 [Ensembl]. Ribosomal protein S8... 0.1 OrthoFinder
CBI65731 rpsH, HPB8_174 small subunit ribosomal protein S8 [Ensembl]. Ribosomal... 0.16 OrthoFinder
CCG27393 S15Ae SSU ribosomal protein S8p (S15Ae) [Ensembl]. Ribosomal... 0.23 OrthoFinder
CCP43462 rpsH, Rv0718 30S ribosomal protein S8 RpsH [Ensembl]. Ribosomal... 0.17 OrthoFinder
CPD13989 rpsH, ERS093114_02136 30S ribosomal protein S8 [Ensembl]. Ribosomal protein S8... 0.2 OrthoFinder
CRO74158 rpsH 30S ribosomal protein S8 [Ensembl]. Ribosomal protein S8... 0.19 OrthoFinder
EDJ91370 rpsH, CGSHi22421_04683 30S ribosomal protein S8 [Ensembl]. Ribosomal protein S8... 0.26 OrthoFinder
KNA54986 VCV51_033169 ribosomal protein S8 [Ensembl]. Ribosomal protein S8... 0.18 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
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    • Type GO Term Name Evidence Source
    MF GO:0000049 tRNA binding IEP Enrichment
    MF GO:0000166 nucleotide binding IEP Enrichment
    MF GO:0003676 nucleic acid binding IEP Enrichment
    MF GO:0003723 RNA binding IEP Enrichment
    MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Enrichment
    MF GO:0004525 ribonuclease III activity IEP Enrichment
    MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Enrichment
    MF GO:0004812 aminoacyl-tRNA ligase activity IEP Enrichment
    MF GO:0004813 alanine-tRNA ligase activity IEP Enrichment
    MF GO:0004826 phenylalanine-tRNA ligase activity IEP Enrichment
    MF GO:0004827 proline-tRNA ligase activity IEP Enrichment
    MF GO:0004832 valine-tRNA ligase activity IEP Enrichment
    MF GO:0005488 binding IEP Enrichment
    MF GO:0005524 ATP binding IEP Enrichment
    CC GO:0005737 cytoplasm IEP Enrichment
    BP GO:0006082 organic acid metabolic process IEP Enrichment
    BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
    BP GO:0006351 transcription, DNA-templated IEP Enrichment
    BP GO:0006399 tRNA metabolic process IEP Enrichment
    BP GO:0006412 translation IEP Enrichment
    BP GO:0006418 tRNA aminoacylation for protein translation IEP Enrichment
    BP GO:0006419 alanyl-tRNA aminoacylation IEP Enrichment
    BP GO:0006433 prolyl-tRNA aminoacylation IEP Enrichment
    BP GO:0006438 valyl-tRNA aminoacylation IEP Enrichment
    BP GO:0006518 peptide metabolic process IEP Enrichment
    BP GO:0006520 cellular amino acid metabolic process IEP Enrichment
    BP GO:0006725 cellular aromatic compound metabolic process IEP Enrichment
    BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
    BP GO:0008152 metabolic process IEP Enrichment
    BP GO:0009059 macromolecule biosynthetic process IEP Enrichment
    BP GO:0016070 RNA metabolic process IEP Enrichment
    MF GO:0016779 nucleotidyltransferase activity IEP Enrichment
    MF GO:0016787 hydrolase activity IEP Enrichment
    MF GO:0016788 hydrolase activity, acting on ester bonds IEP Enrichment
    MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Enrichment
    MF GO:0016874 ligase activity IEP Enrichment
    MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Enrichment
    MF GO:0017076 purine nucleotide binding IEP Enrichment
    BP GO:0019538 protein metabolic process IEP Enrichment
    BP GO:0019752 carboxylic acid metabolic process IEP Enrichment
    MF GO:0019843 rRNA binding IEP Enrichment
    MF GO:0030554 adenyl nucleotide binding IEP Enrichment
    MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP Enrichment
    MF GO:0032553 ribonucleotide binding IEP Enrichment
    MF GO:0032555 purine ribonucleotide binding IEP Enrichment
    MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
    MF GO:0034062 5'-3' RNA polymerase activity IEP Enrichment
    BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
    BP GO:0034645 cellular macromolecule biosynthetic process IEP Enrichment
    BP GO:0034660 ncRNA metabolic process IEP Enrichment
    MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
    MF GO:0036094 small molecule binding IEP Enrichment
    BP GO:0043038 amino acid activation IEP Enrichment
    BP GO:0043039 tRNA aminoacylation IEP Enrichment
    BP GO:0043043 peptide biosynthetic process IEP Enrichment
    MF GO:0043167 ion binding IEP Enrichment
    MF GO:0043168 anion binding IEP Enrichment
    BP GO:0043170 macromolecule metabolic process IEP Enrichment
    BP GO:0043436 oxoacid metabolic process IEP Enrichment
    BP GO:0043603 cellular amide metabolic process IEP Enrichment
    BP GO:0043604 amide biosynthetic process IEP Enrichment
    BP GO:0044237 cellular metabolic process IEP Enrichment
    BP GO:0044238 primary metabolic process IEP Enrichment
    BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
    BP GO:0044267 cellular protein metabolic process IEP Enrichment
    BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Enrichment
    BP GO:0044281 small molecule metabolic process IEP Enrichment
    BP GO:0046483 heterocycle metabolic process IEP Enrichment
    BP GO:0071704 organic substance metabolic process IEP Enrichment
    BP GO:0090304 nucleic acid metabolic process IEP Enrichment
    MF GO:0097159 organic cyclic compound binding IEP Enrichment
    MF GO:0097367 carbohydrate derivative binding IEP Enrichment
    BP GO:0097659 nucleic acid-templated transcription IEP Enrichment
    MF GO:0097747 RNA polymerase activity IEP Enrichment
    MF GO:0140098 catalytic activity, acting on RNA IEP Enrichment
    MF GO:0140101 catalytic activity, acting on a tRNA IEP Enrichment
    MF GO:1901265 nucleoside phosphate binding IEP Enrichment
    BP GO:1901360 organic cyclic compound metabolic process IEP Enrichment
    MF GO:1901363 heterocyclic compound binding IEP Enrichment
    BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
    BP GO:1901566 organonitrogen compound biosynthetic process IEP Enrichment
    InterPro domains Description Start Stop
    IPR000630 Ribosomal_S8 5 132
    UniProtKB U3X2Y8