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  5. CCL20597

CCL20597 (rplM, BN171_70037)


Aliases : rplM, BN171_70037

Description : 50S ribosomal protein L13 [Ensembl]. Ribosomal protein L13 [Interproscan].


Gene families : OG_02_0000475 (OrthoFinder) Phylogenetic Tree(s): OG0000475_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CCL20597
Cluster HCCA: Cluster_2

Target Alias Description ECC score Gene Family Method Actions
AAC76263 rplM, b3231 50S ribosomal subunit protein L13 [Ensembl]. Ribosomal... 0.11 OrthoFinder
AAK99075 spr0271, rplM 50S Ribosomal protein L13 [Ensembl]. Ribosomal protein... 0.08 OrthoFinder
AAL22214 STM3345, rplM 50S ribosomal subunit protein L13 [Ensembl]. Ribosomal... 0.12 OrthoFinder
ADK87111 rplM, MPNE_0722 ribosomal protein L13 [Ensembl]. Ribosomal protein L13... 0.03 OrthoFinder
AEA95174 rplM, OG1RF_12487 50S ribosomal protein L13 [Ensembl]. Ribosomal protein... 0.09 OrthoFinder
AGT22335 N559_0533 ribosomal protein L13 [Ensembl]. 0.07 OrthoFinder
AHY40659 rplM, CJ8421_07410 50S ribosomal protein L13 [Ensembl]. Ribosomal protein... 0.12 OrthoFinder
AKI50532 rplM, L2625_02742 ribosomal protein L13 [Ensembl]. Ribosomal protein L13... 0.08 OrthoFinder
AKP14942 rplM, WX61_00876 50S ribosomal protein L13 [Ensembl]. Ribosomal protein... 0.02 OrthoFinder
CBI67038 rplM, HPB8_1481 large subunit ribosomal protein L13 [Ensembl]. Ribosomal... 0.06 OrthoFinder
CCG27317 L13Ae LSU ribosomal protein L13p (L13Ae) [Ensembl]. Ribosomal... 0.1 OrthoFinder
CPD14646 rplM, ERS093114_02155 50S ribosomal protein L13 [Ensembl]. Ribosomal protein... 0.13 OrthoFinder
CRP09073 rplM 50S ribosomal protein L13 [Ensembl]. Ribosomal protein... 0.12 OrthoFinder
EDJ91093 rplM, CGSHi22421_10142 50S ribosomal protein L13 [Ensembl]. Ribosomal protein... 0.05 OrthoFinder
KNA51829 VCV51_033517 ribosomal protein L13 [Ensembl]. Ribosomal protein L13... 0.08 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003747 translation release factor activity IEP Enrichment
MF GO:0003918 DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity IEP Enrichment
MF GO:0004019 adenylosuccinate synthase activity IEP Enrichment
MF GO:0004497 monooxygenase activity IEP Enrichment
MF GO:0004814 arginine-tRNA ligase activity IEP Enrichment
MF GO:0005436 sodium:phosphate symporter activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
CC GO:0005887 integral component of plasma membrane IEP Enrichment
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006259 DNA metabolic process IEP Enrichment
BP GO:0006281 DNA repair IEP Enrichment
BP GO:0006351 transcription, DNA-templated IEP Enrichment
BP GO:0006396 RNA processing IEP Enrichment
BP GO:0006399 tRNA metabolic process IEP Enrichment
BP GO:0006400 tRNA modification IEP Enrichment
BP GO:0006415 translational termination IEP Enrichment
BP GO:0006418 tRNA aminoacylation for protein translation IEP Enrichment
BP GO:0006420 arginyl-tRNA aminoacylation IEP Enrichment
BP GO:0006605 protein targeting IEP Enrichment
BP GO:0006725 cellular aromatic compound metabolic process IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
BP GO:0006817 phosphate ion transport IEP Enrichment
BP GO:0006886 intracellular protein transport IEP Enrichment
BP GO:0006974 cellular response to DNA damage stimulus IEP Enrichment
MF GO:0008079 translation termination factor activity IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
BP GO:0008616 queuosine biosynthetic process IEP Enrichment
MF GO:0008961 phosphatidylglycerol-prolipoprotein diacylglyceryl transferase activity IEP Enrichment
BP GO:0009116 nucleoside metabolic process IEP Enrichment
BP GO:0009119 ribonucleoside metabolic process IEP Enrichment
BP GO:0009163 nucleoside biosynthetic process IEP Enrichment
BP GO:0009451 RNA modification IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
BP GO:0015833 peptide transport IEP Enrichment
BP GO:0016043 cellular component organization IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Enrichment
MF GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) IEP Enrichment
MF GO:0016874 ligase activity IEP Enrichment
MF GO:0016887 ATPase IEP Enrichment
MF GO:0018580 nitronate monooxygenase activity IEP Enrichment
BP GO:0022411 cellular component disassembly IEP Enrichment
CC GO:0031226 intrinsic component of plasma membrane IEP Enrichment
BP GO:0032984 protein-containing complex disassembly IEP Enrichment
BP GO:0034404 nucleobase-containing small molecule biosynthetic process IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
BP GO:0034660 ncRNA metabolic process IEP Enrichment
BP GO:0042455 ribonucleoside biosynthetic process IEP Enrichment
BP GO:0042886 amide transport IEP Enrichment
BP GO:0043038 amino acid activation IEP Enrichment
BP GO:0043039 tRNA aminoacylation IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
BP GO:0043412 macromolecule modification IEP Enrichment
BP GO:0043624 cellular protein complex disassembly IEP Enrichment
BP GO:0043933 protein-containing complex subunit organization IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
BP GO:0044238 primary metabolic process IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
BP GO:0044341 sodium-dependent phosphate transport IEP Enrichment
BP GO:0046116 queuosine metabolic process IEP Enrichment
BP GO:0046483 heterocycle metabolic process IEP Enrichment
BP GO:0046907 intracellular transport IEP Enrichment
BP GO:0051641 cellular localization IEP Enrichment
BP GO:0051649 establishment of localization in cell IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
BP GO:0071705 nitrogen compound transport IEP Enrichment
BP GO:0071840 cellular component organization or biogenesis IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
BP GO:0097659 nucleic acid-templated transcription IEP Enrichment
MF GO:0140098 catalytic activity, acting on RNA IEP Enrichment
BP GO:1901360 organic cyclic compound metabolic process IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
BP GO:1901657 glycosyl compound metabolic process IEP Enrichment
BP GO:1901659 glycosyl compound biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR005822 Ribosomal_L13 14 138
UniProtKB U3X306