Coexpression cluster: Cluster_63 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:1901566 organonitrogen compound biosynthetic process 22.73% (10/44) 3.36 0.0 5e-06
GO:0043229 intracellular organelle 13.64% (6/44) 4.24 1e-06 1.7e-05
GO:1901576 organic substance biosynthetic process 25.0% (11/44) 2.81 0.0 1.7e-05
GO:0005840 ribosome 13.64% (6/44) 4.37 0.0 1.7e-05
GO:0043232 intracellular non-membrane-bounded organelle 13.64% (6/44) 4.27 1e-06 1.7e-05
GO:0044271 cellular nitrogen compound biosynthetic process 20.45% (9/44) 3.32 0.0 1.8e-05
GO:0009058 biosynthetic process 27.27% (12/44) 2.55 0.0 1.8e-05
GO:0043228 non-membrane-bounded organelle 13.64% (6/44) 4.15 1e-06 2.1e-05
GO:0043226 organelle 13.64% (6/44) 4.12 1e-06 2.1e-05
GO:0044249 cellular biosynthetic process 22.73% (10/44) 2.7 2e-06 3.8e-05
GO:0043043 peptide biosynthetic process 11.36% (5/44) 4.01 1.2e-05 0.000179
GO:0006518 peptide metabolic process 11.36% (5/44) 4.01 1.2e-05 0.000179
GO:0006412 translation 11.36% (5/44) 4.07 1e-05 0.000182
GO:0003735 structural constituent of ribosome 11.36% (5/44) 4.04 1.1e-05 0.000187
GO:0005198 structural molecule activity 11.36% (5/44) 3.92 1.7e-05 0.000214
GO:0043604 amide biosynthetic process 11.36% (5/44) 3.92 1.7e-05 0.000214
GO:0043603 cellular amide metabolic process 11.36% (5/44) 3.8 2.5e-05 0.000281
GO:1901564 organonitrogen compound metabolic process 22.73% (10/44) 2.29 2.4e-05 0.000285
GO:0034641 cellular nitrogen compound metabolic process 22.73% (10/44) 2.2 4.1e-05 0.000432
GO:0044267 cellular protein metabolic process 11.36% (5/44) 3.58 5.4e-05 0.000545
GO:0008152 metabolic process 34.09% (15/44) 1.57 6.6e-05 0.000628
GO:0034645 cellular macromolecule biosynthetic process 11.36% (5/44) 3.34 0.000119 0.001088
GO:0044237 cellular metabolic process 27.27% (12/44) 1.75 0.000135 0.001178
GO:0006807 nitrogen compound metabolic process 25.0% (11/44) 1.75 0.00028 0.002342
GO:0009231 riboflavin biosynthetic process 4.55% (2/44) 5.89 0.00044 0.003053
GO:0042727 flavin-containing compound biosynthetic process 4.55% (2/44) 5.89 0.00044 0.003053
GO:0006771 riboflavin metabolic process 4.55% (2/44) 5.89 0.00044 0.003053
GO:0042726 flavin-containing compound metabolic process 4.55% (2/44) 5.89 0.00044 0.003053
GO:0009059 macromolecule biosynthetic process 11.36% (5/44) 2.98 0.000392 0.003151
GO:0071704 organic substance metabolic process 27.27% (12/44) 1.54 0.000521 0.003491
GO:0003723 RNA binding 9.09% (4/44) 3.23 0.000808 0.00524
GO:0019538 protein metabolic process 11.36% (5/44) 2.67 0.001026 0.006445
GO:0090079 translation regulator activity, nucleic acid binding 4.55% (2/44) 5.04 0.001559 0.008703
GO:0045182 translation regulator activity 4.55% (2/44) 5.04 0.001559 0.008703
GO:0008135 translation factor activity, RNA binding 4.55% (2/44) 5.04 0.001559 0.008703
GO:0044283 small molecule biosynthetic process 9.09% (4/44) 3.0 0.001479 0.00901
GO:0044238 primary metabolic process 22.73% (10/44) 1.54 0.00173 0.009396
GO:0018130 heterocycle biosynthetic process 9.09% (4/44) 2.78 0.002574 0.013616
GO:1901362 organic cyclic compound biosynthetic process 9.09% (4/44) 2.7 0.003162 0.016294
GO:0008883 glutamyl-tRNA reductase activity 2.27% (1/44) 7.21 0.006757 0.02663
GO:0004612 phosphoenolpyruvate carboxykinase (ATP) activity 2.27% (1/44) 7.21 0.006757 0.02663
GO:0046037 GMP metabolic process 2.27% (1/44) 7.21 0.006757 0.02663
GO:0140597 protein carrier activity 2.27% (1/44) 7.21 0.006757 0.02663
GO:0004017 adenylate kinase activity 2.27% (1/44) 7.21 0.006757 0.02663
GO:0004055 argininosuccinate synthase activity 2.27% (1/44) 7.21 0.006757 0.02663
GO:0006177 GMP biosynthetic process 2.27% (1/44) 7.21 0.006757 0.02663
GO:0003922 GMP synthase (glutamine-hydrolyzing) activity 2.27% (1/44) 7.21 0.006757 0.02663
GO:0008686 3,4-dihydroxy-2-butanone-4-phosphate synthase activity 2.27% (1/44) 7.21 0.006757 0.02663
GO:0032977 membrane insertase activity 2.27% (1/44) 7.21 0.006757 0.02663
GO:0009349 riboflavin synthase complex 2.27% (1/44) 7.21 0.006757 0.02663
GO:0140104 molecular carrier activity 2.27% (1/44) 7.21 0.006757 0.02663
GO:0044260 cellular macromolecule metabolic process 11.36% (5/44) 2.02 0.007247 0.028013
GO:0016830 carbon-carbon lyase activity 4.55% (2/44) 3.89 0.007848 0.029211
GO:0044281 small molecule metabolic process 11.36% (5/44) 2.0 0.007755 0.02941
GO:0009110 vitamin biosynthetic process 4.55% (2/44) 3.82 0.008637 0.029931
GO:0006766 vitamin metabolic process 4.55% (2/44) 3.82 0.008637 0.029931
GO:0006767 water-soluble vitamin metabolic process 4.55% (2/44) 3.82 0.008637 0.029931
GO:0042364 water-soluble vitamin biosynthetic process 4.55% (2/44) 3.82 0.008637 0.029931
GO:0016741 transferase activity, transferring one-carbon groups 6.82% (3/44) 2.71 0.010627 0.036203
GO:0016879 ligase activity, forming carbon-nitrogen bonds 4.55% (2/44) 3.62 0.011206 0.037542
GO:0050145 nucleoside monophosphate kinase activity 2.27% (1/44) 6.21 0.013469 0.038675
GO:0008924 malate dehydrogenase (quinone) activity 2.27% (1/44) 6.21 0.013469 0.038675
GO:0016901 oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor 2.27% (1/44) 6.21 0.013469 0.038675
GO:0006413 translational initiation 2.27% (1/44) 6.21 0.013469 0.038675
GO:0016776 phosphotransferase activity, phosphate group as acceptor 2.27% (1/44) 6.21 0.013469 0.038675
GO:0003743 translation initiation factor activity 2.27% (1/44) 6.21 0.013469 0.038675
GO:0019205 nucleobase-containing compound kinase activity 2.27% (1/44) 6.21 0.013469 0.038675
GO:0006526 arginine biosynthetic process 2.27% (1/44) 6.21 0.013469 0.038675
GO:0004611 phosphoenolpyruvate carboxykinase activity 2.27% (1/44) 6.21 0.013469 0.038675
GO:0003674 molecular_function 54.55% (24/44) 0.56 0.012969 0.042734
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Campylobacter jejuni HCCA Cluster_5 0.033 OrthoFinder Compare
Campylobacter jejuni HCCA Cluster_8 0.056 OrthoFinder Compare
Clostridioides difficile HCCA Cluster_2 0.036 OrthoFinder Compare
Enterococcus faecalis HCCA Cluster_18 0.048 OrthoFinder Compare
Escherichia coli HCCA Cluster_1 0.042 OrthoFinder Compare
Escherichia coli HCCA Cluster_38 0.032 OrthoFinder Compare
Haemophilus influenzae HCCA Cluster_14 0.029 OrthoFinder Compare
Haemophilus influenzae HCCA Cluster_17 0.033 OrthoFinder Compare
Haemophilus influenzae HCCA Cluster_23 0.033 OrthoFinder Compare
Helicobacter pylori HCCA Cluster_9 0.03 OrthoFinder Compare
Klebsiella pneumoniae HCCA Cluster_26 0.028 OrthoFinder Compare
Klebsiella pneumoniae HCCA Cluster_44 0.049 OrthoFinder Compare
Listeria monocytogenes HCCA Cluster_2 0.051 OrthoFinder Compare
Listeria monocytogenes HCCA Cluster_18 0.037 OrthoFinder Compare
Mycobacterium tuberculosis HCCA Cluster_25 0.03 OrthoFinder Compare
Mycobacterium tuberculosis HCCA Cluster_35 0.028 OrthoFinder Compare
Neisseria gonorrhoeae HCCA Cluster_6 0.034 OrthoFinder Compare
Neisseria gonorrhoeae HCCA Cluster_15 0.034 OrthoFinder Compare
Neisseria gonorrhoeae HCCA Cluster_17 0.04 OrthoFinder Compare
Salmonella enterica HCCA Cluster_3 0.04 OrthoFinder Compare
Salmonella enterica HCCA Cluster_23 0.055 OrthoFinder Compare
Salmonella enterica HCCA Cluster_44 0.055 OrthoFinder Compare
Staphylococcus aureus HCCA Cluster_3 0.04 OrthoFinder Compare
Staphylococcus aureus HCCA Cluster_14 0.031 OrthoFinder Compare
Staphylococcus aureus HCCA Cluster_24 0.06 OrthoFinder Compare
Streptococcus pneumoniae HCCA Cluster_7 0.033 OrthoFinder Compare
Streptococcus pneumoniae HCCA Cluster_13 0.034 OrthoFinder Compare
Streptococcus pyogenes HCAA Cluster_4 0.029 OrthoFinder Compare
Vibrio cholerae HCCA Cluster_8 0.036 OrthoFinder Compare
Vibrio cholerae HCCA Cluster_19 0.029 OrthoFinder Compare
Vibrio cholerae HCCA Cluster_36 0.044 OrthoFinder Compare
Sequences (44) (download table)

InterPro Domains

GO Terms

Family Terms