Coexpression cluster: Cluster_51 (HCCA)

View as:



Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:1901360 organic cyclic compound metabolic process 25.0% (21/84) 2.5 0.0 0.0
GO:0044237 cellular metabolic process 32.14% (27/84) 1.99 0.0 0.0
GO:0006725 cellular aromatic compound metabolic process 23.81% (20/84) 2.45 0.0 0.0
GO:0034641 cellular nitrogen compound metabolic process 25.0% (21/84) 2.34 0.0 0.0
GO:0006139 nucleobase-containing compound metabolic process 21.43% (18/84) 2.59 0.0 0.0
GO:0008152 metabolic process 36.9% (31/84) 1.68 0.0 0.0
GO:0046483 heterocycle metabolic process 22.62% (19/84) 2.4 0.0 0.0
GO:0044238 primary metabolic process 29.76% (25/84) 1.93 0.0 0.0
GO:0071704 organic substance metabolic process 30.95% (26/84) 1.72 0.0 1e-06
GO:0006807 nitrogen compound metabolic process 27.38% (23/84) 1.88 0.0 1e-06
GO:0035639 purine ribonucleoside triphosphate binding 20.24% (17/84) 2.28 0.0 1e-06
GO:0017076 purine nucleotide binding 20.24% (17/84) 2.23 0.0 2e-06
GO:0032555 purine ribonucleotide binding 20.24% (17/84) 2.24 0.0 2e-06
GO:0003723 RNA binding 10.71% (9/84) 3.47 0.0 2e-06
GO:0043168 anion binding 23.81% (20/84) 1.91 0.0 4e-06
GO:0032553 ribonucleotide binding 20.24% (17/84) 2.14 0.0 4e-06
GO:1901363 heterocyclic compound binding 34.52% (29/84) 1.44 0.0 4e-06
GO:0097159 organic cyclic compound binding 34.52% (29/84) 1.44 0.0 4e-06
GO:0016070 RNA metabolic process 11.9% (10/84) 3.03 0.0 5e-06
GO:0097367 carbohydrate derivative binding 20.24% (17/84) 2.09 0.0 5e-06
GO:0044281 small molecule metabolic process 15.48% (13/84) 2.45 1e-06 9e-06
GO:0036094 small molecule binding 23.81% (20/84) 1.78 1e-06 1.1e-05
GO:0005488 binding 38.1% (32/84) 1.25 1e-06 1.2e-05
GO:1901265 nucleoside phosphate binding 21.43% (18/84) 1.84 2e-06 2.1e-05
GO:0000166 nucleotide binding 21.43% (18/84) 1.84 2e-06 2.1e-05
GO:0090304 nucleic acid metabolic process 14.29% (12/84) 2.35 3e-06 4e-05
GO:0006396 RNA processing 7.14% (6/84) 3.69 5e-06 6.9e-05
GO:0043167 ion binding 23.81% (20/84) 1.58 6e-06 7.7e-05
GO:0003674 molecular_function 60.71% (51/84) 0.71 8e-06 9e-05
GO:0030554 adenyl nucleotide binding 15.48% (13/84) 2.0 1.7e-05 0.000177
GO:0072522 purine-containing compound biosynthetic process 4.76% (4/84) 4.58 1.7e-05 0.000179
GO:0005524 ATP binding 15.48% (13/84) 2.01 1.6e-05 0.000181
GO:0032559 adenyl ribonucleotide binding 15.48% (13/84) 2.01 1.6e-05 0.000181
GO:1901362 organic cyclic compound biosynthetic process 9.52% (8/84) 2.77 2e-05 0.000195
GO:0034660 ncRNA metabolic process 7.14% (6/84) 3.34 2.4e-05 0.000232
GO:0009058 biosynthetic process 16.67% (14/84) 1.84 2.7e-05 0.000259
GO:0009987 cellular process 35.71% (30/84) 1.03 4.5e-05 0.000416
GO:0019438 aromatic compound biosynthetic process 8.33% (7/84) 2.78 6.3e-05 0.000566
GO:0043170 macromolecule metabolic process 16.67% (14/84) 1.71 7.5e-05 0.000653
GO:1901566 organonitrogen compound biosynthetic process 10.71% (9/84) 2.28 8.8e-05 0.000752
GO:0005525 GTP binding 4.76% (4/84) 3.95 0.000107 0.000863
GO:0072521 purine-containing compound metabolic process 4.76% (4/84) 3.95 0.000107 0.000863
GO:1901564 organonitrogen compound metabolic process 15.48% (13/84) 1.74 0.000113 0.000896
GO:0044249 cellular biosynthetic process 13.1% (11/84) 1.91 0.000143 0.001102
GO:0006432 phenylalanyl-tRNA aminoacylation 2.38% (2/84) 6.28 0.000164 0.001215
GO:0009095 aromatic amino acid family biosynthetic process, prephenate pathway 2.38% (2/84) 6.28 0.000164 0.001215
GO:1901576 organic substance biosynthetic process 13.1% (11/84) 1.88 0.000173 0.001251
GO:0008150 biological_process 45.24% (38/84) 0.75 0.000225 0.001593
GO:0003824 catalytic activity 36.9% (31/84) 0.87 0.000261 0.001777
GO:0055086 nucleobase-containing small molecule metabolic process 5.95% (5/84) 3.11 0.000258 0.001791
GO:0044271 cellular nitrogen compound biosynthetic process 9.52% (8/84) 2.22 0.00029 0.001934
GO:0006164 purine nucleotide biosynthetic process 3.57% (3/84) 4.28 0.000419 0.002589
GO:0032561 guanyl ribonucleotide binding 4.76% (4/84) 3.47 0.000417 0.002623
GO:0019001 guanyl nucleotide binding 4.76% (4/84) 3.47 0.000417 0.002623
GO:0003676 nucleic acid binding 16.67% (14/84) 1.48 0.000407 0.002661
GO:0070566 adenylyltransferase activity 2.38% (2/84) 5.69 0.000489 0.002918
GO:0004826 phenylalanine-tRNA ligase activity 2.38% (2/84) 5.69 0.000489 0.002918
GO:0018130 heterocycle biosynthetic process 7.14% (6/84) 2.44 0.000794 0.004655
GO:0006399 tRNA metabolic process 4.76% (4/84) 3.15 0.000995 0.005545
GO:0140101 catalytic activity, acting on a tRNA 4.76% (4/84) 3.15 0.000995 0.005545
GO:0000049 tRNA binding 2.38% (2/84) 5.28 0.00097 0.005591
GO:0016772 transferase activity, transferring phosphorus-containing groups 8.33% (7/84) 2.1 0.001185 0.006501
GO:0006796 phosphate-containing compound metabolic process 5.95% (5/84) 2.62 0.001238 0.006684
GO:0016874 ligase activity 5.95% (5/84) 2.6 0.00133 0.007065
GO:0009401 phosphoenolpyruvate-dependent sugar phosphotransferase system 2.38% (2/84) 4.95 0.001603 0.008259
GO:0009073 aromatic amino acid family biosynthetic process 2.38% (2/84) 4.95 0.001603 0.008259
GO:0006793 phosphorus metabolic process 5.95% (5/84) 2.53 0.001635 0.008294
GO:0006163 purine nucleotide metabolic process 3.57% (3/84) 3.61 0.001728 0.008642
GO:1901293 nucleoside phosphate biosynthetic process 3.57% (3/84) 3.47 0.002329 0.011151
GO:0009165 nucleotide biosynthetic process 3.57% (3/84) 3.47 0.002329 0.011151
GO:0006418 tRNA aminoacylation for protein translation 3.57% (3/84) 3.47 0.002329 0.011151
GO:0019752 carboxylic acid metabolic process 7.14% (6/84) 2.12 0.002462 0.011468
GO:0043436 oxoacid metabolic process 7.14% (6/84) 2.12 0.002462 0.011468
GO:0043038 amino acid activation 3.57% (3/84) 3.34 0.003044 0.01344
GO:0034470 ncRNA processing 3.57% (3/84) 3.34 0.003044 0.01344
GO:0043039 tRNA aminoacylation 3.57% (3/84) 3.34 0.003044 0.01344
GO:0006520 cellular amino acid metabolic process 5.95% (5/84) 2.33 0.003024 0.013896
GO:0016875 ligase activity, forming carbon-oxygen bonds 3.57% (3/84) 3.28 0.003446 0.014647
GO:0004812 aminoacyl-tRNA ligase activity 3.57% (3/84) 3.28 0.003446 0.014647
GO:0034654 nucleobase-containing compound biosynthetic process 4.76% (4/84) 2.66 0.003511 0.014738
GO:0006082 organic acid metabolic process 7.14% (6/84) 2.03 0.003383 0.014745
GO:0008643 carbohydrate transport 2.38% (2/84) 4.28 0.004378 0.017932
GO:0019637 organophosphate metabolic process 4.76% (4/84) 2.58 0.004357 0.018066
GO:0016779 nucleotidyltransferase activity 3.57% (3/84) 3.11 0.004844 0.019376
GO:0016740 transferase activity 13.1% (11/84) 1.29 0.004809 0.019464
GO:0140098 catalytic activity, acting on RNA 4.76% (4/84) 2.52 0.004992 0.019734
GO:0009117 nucleotide metabolic process 3.57% (3/84) 3.05 0.005375 0.021007
GO:0006753 nucleoside phosphate metabolic process 3.57% (3/84) 3.0 0.00594 0.022951
GO:0009072 aromatic amino acid family metabolic process 2.38% (2/84) 3.95 0.006918 0.02643
GO:0006364 rRNA processing 2.38% (2/84) 3.82 0.008385 0.03133
GO:0016072 rRNA metabolic process 2.38% (2/84) 3.82 0.008385 0.03133
GO:0006308 DNA catabolic process 1.19% (1/84) 6.28 0.012899 0.035657
GO:0004652 polynucleotide adenylyltransferase activity 1.19% (1/84) 6.28 0.012899 0.035657
GO:0003919 FMN adenylyltransferase activity 1.19% (1/84) 6.28 0.012899 0.035657
GO:1990817 RNA adenylyltransferase activity 1.19% (1/84) 6.28 0.012899 0.035657
GO:0004810 tRNA adenylyltransferase activity 1.19% (1/84) 6.28 0.012899 0.035657
GO:1902223 erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process 1.19% (1/84) 6.28 0.012899 0.035657
GO:0004665 prephenate dehydrogenase (NADP+) activity 1.19% (1/84) 6.28 0.012899 0.035657
GO:0009318 exodeoxyribonuclease VII complex 1.19% (1/84) 6.28 0.012899 0.035657
GO:0009094 L-phenylalanine biosynthetic process 1.19% (1/84) 6.28 0.012899 0.035657
GO:0009113 purine nucleobase biosynthetic process 1.19% (1/84) 6.28 0.012899 0.035657
GO:0004019 adenylosuccinate synthase activity 1.19% (1/84) 6.28 0.012899 0.035657
GO:0004664 prephenate dehydratase activity 1.19% (1/84) 6.28 0.012899 0.035657
GO:0004807 triose-phosphate isomerase activity 1.19% (1/84) 6.28 0.012899 0.035657
GO:0043244 regulation of protein-containing complex disassembly 1.19% (1/84) 6.28 0.012899 0.035657
GO:0031554 regulation of DNA-templated transcription, termination 1.19% (1/84) 6.28 0.012899 0.035657
GO:0008531 riboflavin kinase activity 1.19% (1/84) 6.28 0.012899 0.035657
GO:0015936 coenzyme A metabolic process 1.19% (1/84) 6.28 0.012899 0.035657
GO:0015937 coenzyme A biosynthetic process 1.19% (1/84) 6.28 0.012899 0.035657
GO:0004140 dephospho-CoA kinase activity 1.19% (1/84) 6.28 0.012899 0.035657
GO:0033866 nucleoside bisphosphate biosynthetic process 1.19% (1/84) 6.28 0.012899 0.035657
GO:0003937 IMP cyclohydrolase activity 1.19% (1/84) 6.28 0.012899 0.035657
GO:0004643 phosphoribosylaminoimidazolecarboxamide formyltransferase activity 1.19% (1/84) 6.28 0.012899 0.035657
GO:0006144 purine nucleobase metabolic process 1.19% (1/84) 6.28 0.012899 0.035657
GO:0034033 purine nucleoside bisphosphate biosynthetic process 1.19% (1/84) 6.28 0.012899 0.035657
GO:0034030 ribonucleoside bisphosphate biosynthetic process 1.19% (1/84) 6.28 0.012899 0.035657
GO:0006571 tyrosine biosynthetic process 1.19% (1/84) 6.28 0.012899 0.035657
GO:0004127 cytidylate kinase activity 1.19% (1/84) 6.28 0.012899 0.035657
GO:0004637 phosphoribosylamine-glycine ligase activity 1.19% (1/84) 6.28 0.012899 0.035657
GO:0008977 prephenate dehydrogenase (NAD+) activity 1.19% (1/84) 6.28 0.012899 0.035657
GO:0016835 carbon-oxygen lyase activity 2.38% (2/84) 3.47 0.013531 0.0371
GO:0044283 small molecule biosynthetic process 4.76% (4/84) 2.07 0.01496 0.040692
GO:0090407 organophosphate biosynthetic process 3.57% (3/84) 2.65 0.011732 0.042437
GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups 2.38% (2/84) 3.58 0.011695 0.042756
GO:0016836 hydro-lyase activity 2.38% (2/84) 3.58 0.011695 0.042756
GO:0022804 active transmembrane transporter activity 3.57% (3/84) 2.44 0.017635 0.047585
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Campylobacter jejuni HCCA Cluster_2 0.033 OrthoFinder Compare
Campylobacter jejuni HCCA Cluster_8 0.06 OrthoFinder Compare
Campylobacter jejuni HCCA Cluster_14 0.035 OrthoFinder Compare
Clostridioides difficile HCCA Cluster_2 0.042 OrthoFinder Compare
Clostridioides difficile HCCA Cluster_14 0.06 OrthoFinder Compare
Clostridioides difficile HCCA Cluster_26 0.027 OrthoFinder Compare
Clostridioides difficile HCCA Cluster_27 0.034 OrthoFinder Compare
Clostridioides difficile HCCA Cluster_30 0.042 OrthoFinder Compare
Clostridioides difficile HCCA Cluster_38 0.028 OrthoFinder Compare
Enterococcus faecalis HCCA Cluster_2 0.029 OrthoFinder Compare
Enterococcus faecalis HCCA Cluster_13 0.027 OrthoFinder Compare
Enterococcus faecalis HCCA Cluster_15 0.049 OrthoFinder Compare
Enterococcus faecalis HCCA Cluster_29 0.033 OrthoFinder Compare
Escherichia coli HCCA Cluster_1 0.067 OrthoFinder Compare
Escherichia coli HCCA Cluster_24 0.039 OrthoFinder Compare
Escherichia coli HCCA Cluster_29 0.05 OrthoFinder Compare
Escherichia coli HCCA Cluster_40 0.037 OrthoFinder Compare
Escherichia coli HCCA Cluster_41 0.031 OrthoFinder Compare
Haemophilus influenzae HCCA Cluster_7 0.036 OrthoFinder Compare
Haemophilus influenzae HCCA Cluster_8 0.032 OrthoFinder Compare
Haemophilus influenzae HCCA Cluster_11 0.045 OrthoFinder Compare
Haemophilus influenzae HCCA Cluster_15 0.028 OrthoFinder Compare
Haemophilus influenzae HCCA Cluster_18 0.032 OrthoFinder Compare
Helicobacter pylori HCCA Cluster_14 0.041 OrthoFinder Compare
Helicobacter pylori HCCA Cluster_18 0.032 OrthoFinder Compare
Klebsiella pneumoniae HCCA Cluster_12 0.041 OrthoFinder Compare
Klebsiella pneumoniae HCCA Cluster_26 0.033 OrthoFinder Compare
Klebsiella pneumoniae HCCA Cluster_34 0.043 OrthoFinder Compare
Klebsiella pneumoniae HCCA Cluster_38 0.031 OrthoFinder Compare
Klebsiella pneumoniae HCCA Cluster_44 0.071 OrthoFinder Compare
Listeria monocytogenes HCCA Cluster_7 0.036 OrthoFinder Compare
Listeria monocytogenes HCCA Cluster_10 0.048 OrthoFinder Compare
Listeria monocytogenes HCCA Cluster_18 0.077 OrthoFinder Compare
Listeria monocytogenes HCCA Cluster_24 0.031 OrthoFinder Compare
Mycobacterium tuberculosis HCCA Cluster_28 0.032 OrthoFinder Compare
Neisseria gonorrhoeae HCCA Cluster_5 0.037 OrthoFinder Compare
Neisseria gonorrhoeae HCCA Cluster_8 0.046 OrthoFinder Compare
Neisseria gonorrhoeae HCCA Cluster_12 0.073 OrthoFinder Compare
Neisseria gonorrhoeae HCCA Cluster_17 0.037 OrthoFinder Compare
Salmonella enterica HCCA Cluster_3 0.043 OrthoFinder Compare
Salmonella enterica HCCA Cluster_5 0.031 OrthoFinder Compare
Salmonella enterica HCCA Cluster_23 0.062 OrthoFinder Compare
Salmonella enterica HCCA Cluster_31 0.052 OrthoFinder Compare
Salmonella enterica HCCA Cluster_42 0.028 OrthoFinder Compare
Salmonella enterica HCCA Cluster_45 0.038 OrthoFinder Compare
Staphylococcus aureus HCCA Cluster_3 0.036 OrthoFinder Compare
Staphylococcus aureus HCCA Cluster_5 0.048 OrthoFinder Compare
Staphylococcus aureus HCCA Cluster_19 0.029 OrthoFinder Compare
Staphylococcus aureus HCCA Cluster_23 0.031 OrthoFinder Compare
Staphylococcus aureus HCCA Cluster_26 0.029 OrthoFinder Compare
Staphylococcus aureus HCCA Cluster_27 0.031 OrthoFinder Compare
Streptococcus pneumoniae HCCA Cluster_10 0.029 OrthoFinder Compare
Streptococcus pneumoniae HCCA Cluster_13 0.047 OrthoFinder Compare
Streptococcus pneumoniae HCCA Cluster_14 0.034 OrthoFinder Compare
Streptococcus pneumoniae HCCA Cluster_18 0.052 OrthoFinder Compare
Streptococcus pyogenes HCAA Cluster_7 0.043 OrthoFinder Compare
Streptococcus pyogenes HCAA Cluster_11 0.061 OrthoFinder Compare
Streptococcus pyogenes HCAA Cluster_15 0.029 OrthoFinder Compare
Streptococcus pyogenes HCAA Cluster_16 0.031 OrthoFinder Compare
Vibrio cholerae HCCA Cluster_1 0.046 OrthoFinder Compare
Vibrio cholerae HCCA Cluster_8 0.033 OrthoFinder Compare
Vibrio cholerae HCCA Cluster_19 0.028 OrthoFinder Compare
Vibrio cholerae HCCA Cluster_24 0.067 OrthoFinder Compare
Vibrio cholerae HCCA Cluster_32 0.04 OrthoFinder Compare
Vibrio cholerae HCCA Cluster_36 0.031 OrthoFinder Compare
Sequences (84) (download table)

InterPro Domains

GO Terms

Family Terms