AGT22034 (N559_0211)


Aliases : N559_0211

Description : selenocysteinyl-tRNA-specific translation factor [Ensembl]. Elongation factor Tu domain 2, Elongation factor Tu GTP binding domain, GTP-binding domain [InterProScan].


Gene families : OG_02_0001493 (OrthoFinder) Phylogenetic Tree(s): OG0001493_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AGT22034
Cluster HCCA: Cluster_16

Target Alias Description ECC score Gene Family Method Actions
AAC76614 selB, b3590 selenocysteinyl-tRNA-specific translation factor... 0.07 OrthoFinder
AAL22541 STM3682, selB selenocysteinyl-tRNA-specific translation factor... 0.1 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0001514 selenocysteine incorporation IEA Interproscan
MF GO:0003723 RNA binding IEA Interproscan
MF GO:0003746 translation elongation factor activity IEA Interproscan
MF GO:0003924 GTPase activity IEA Interproscan
MF GO:0005525 GTP binding IEA Interproscan
CC GO:0005737 cytoplasm IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0004418 hydroxymethylbilane synthase activity IEP Enrichment
MF GO:0004601 peroxidase activity IEP Enrichment
BP GO:0006040 amino sugar metabolic process IEP Enrichment
BP GO:0006050 mannosamine metabolic process IEP Enrichment
BP GO:0006051 N-acetylmannosamine metabolic process IEP Enrichment
BP GO:0006091 generation of precursor metabolites and energy IEP Enrichment
BP GO:0006766 vitamin metabolic process IEP Enrichment
BP GO:0006767 water-soluble vitamin metabolic process IEP Enrichment
BP GO:0006979 response to oxidative stress IEP Enrichment
BP GO:0009110 vitamin biosynthetic process IEP Enrichment
BP GO:0009235 cobalamin metabolic process IEP Enrichment
BP GO:0009236 cobalamin biosynthetic process IEP Enrichment
MF GO:0016209 antioxidant activity IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Enrichment
MF GO:0016853 isomerase activity IEP Enrichment
MF GO:0016854 racemase and epimerase activity IEP Enrichment
MF GO:0016855 racemase and epimerase activity, acting on amino acids and derivatives IEP Enrichment
MF GO:0016867 intramolecular transferase activity, transferring acyl groups IEP Enrichment
MF GO:0016993 precorrin-8X methylmutase activity IEP Enrichment
BP GO:0018130 heterocycle biosynthetic process IEP Enrichment
BP GO:0019438 aromatic compound biosynthetic process IEP Enrichment
BP GO:0019645 anaerobic electron transport chain IEP Enrichment
MF GO:0020037 heme binding IEP Enrichment
BP GO:0022900 electron transport chain IEP Enrichment
BP GO:0022904 respiratory electron transport chain IEP Enrichment
MF GO:0030976 thiamine pyrophosphate binding IEP Enrichment
BP GO:0033013 tetrapyrrole metabolic process IEP Enrichment
BP GO:0033014 tetrapyrrole biosynthetic process IEP Enrichment
MF GO:0036361 racemase activity, acting on amino acids and derivatives IEP Enrichment
BP GO:0042364 water-soluble vitamin biosynthetic process IEP Enrichment
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Enrichment
BP GO:0044283 small molecule biosynthetic process IEP Enrichment
MF GO:0046906 tetrapyrrole binding IEP Enrichment
MF GO:0047465 N-acylglucosamine-6-phosphate 2-epimerase activity IEP Enrichment
MF GO:0048472 threonine-phosphate decarboxylase activity IEP Enrichment
MF GO:0052855 ADP-dependent NAD(P)H-hydrate dehydratase activity IEP Enrichment
BP GO:0055114 obsolete oxidation-reduction process IEP Enrichment
BP GO:1901362 organic cyclic compound biosynthetic process IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
BP GO:1901566 organonitrogen compound biosynthetic process IEP Enrichment
MF GO:1901681 sulfur compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR015191 Elong_fac_SelB-wing-hlx_typ-3 564 606
IPR004161 EFTu-like_2 189 256
IPR015190 Elong_fac_SelB-wing-hlx_typ-2 425 481
IPR000795 T_Tr_GTP-bd_dom 2 164
No external refs found!