CCL19878 (cbiC, BN171_3580013)


Aliases : cbiC, BN171_3580013

Description : Cobalt-precorrin-8X methylmutase (Cobalt-precorrin isomerase) (HBA synthase) [Ensembl]. Precorrin-8X methylmutase [Interproscan].


Gene families : OG_02_0002139 (OrthoFinder) Phylogenetic Tree(s): OG0002139_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CCL19878
Cluster HCCA: Cluster_12

Target Alias Description ECC score Gene Family Method Actions
AAL20937 STM2033, cbiC synthesis of vitamin B12 adenosyl cobalamide precursor... 0.06 OrthoFinder
AGT22823 N559_1042 cobalt-precorrin-8X methylmutase [Ensembl]. 0.04 OrthoFinder
AKI49121 cobH, L2625_01210 precorrin-8X methylmutase [Ensembl]. Cobalamin... 0.06 OrthoFinder
CRP04516 cobH Precorrin-8X methylmutase [Ensembl]. Precorrin-8X... 0.03 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0009236 cobalamin biosynthetic process IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Enrichment
MF GO:0004175 endopeptidase activity IEP Enrichment
MF GO:0004252 serine-type endopeptidase activity IEP Enrichment
MF GO:0004418 hydroxymethylbilane synthase activity IEP Enrichment
MF GO:0004852 uroporphyrinogen-III synthase activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005507 copper ion binding IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006220 pyrimidine nucleotide metabolic process IEP Enrichment
BP GO:0006221 pyrimidine nucleotide biosynthetic process IEP Enrichment
BP GO:0006231 dTMP biosynthetic process IEP Enrichment
BP GO:0006289 nucleotide-excision repair IEP Enrichment
BP GO:0006396 RNA processing IEP Enrichment
BP GO:0006753 nucleoside phosphate metabolic process IEP Enrichment
BP GO:0008104 protein localization IEP Enrichment
MF GO:0008168 methyltransferase activity IEP Enrichment
MF GO:0008173 RNA methyltransferase activity IEP Enrichment
MF GO:0008233 peptidase activity IEP Enrichment
MF GO:0008236 serine-type peptidase activity IEP Enrichment
MF GO:0008762 UDP-N-acetylmuramate dehydrogenase activity IEP Enrichment
BP GO:0009117 nucleotide metabolic process IEP Enrichment
BP GO:0009123 nucleoside monophosphate metabolic process IEP Enrichment
BP GO:0009124 nucleoside monophosphate biosynthetic process IEP Enrichment
BP GO:0009129 pyrimidine nucleoside monophosphate metabolic process IEP Enrichment
BP GO:0009130 pyrimidine nucleoside monophosphate biosynthetic process IEP Enrichment
BP GO:0009157 deoxyribonucleoside monophosphate biosynthetic process IEP Enrichment
BP GO:0009162 deoxyribonucleoside monophosphate metabolic process IEP Enrichment
BP GO:0009165 nucleotide biosynthetic process IEP Enrichment
BP GO:0009176 pyrimidine deoxyribonucleoside monophosphate metabolic process IEP Enrichment
BP GO:0009177 pyrimidine deoxyribonucleoside monophosphate biosynthetic process IEP Enrichment
BP GO:0009219 pyrimidine deoxyribonucleotide metabolic process IEP Enrichment
BP GO:0009221 pyrimidine deoxyribonucleotide biosynthetic process IEP Enrichment
BP GO:0009262 deoxyribonucleotide metabolic process IEP Enrichment
BP GO:0009263 deoxyribonucleotide biosynthetic process IEP Enrichment
BP GO:0009265 2'-deoxyribonucleotide biosynthetic process IEP Enrichment
BP GO:0009394 2'-deoxyribonucleotide metabolic process IEP Enrichment
BP GO:0015031 protein transport IEP Enrichment
MF GO:0015103 inorganic anion transmembrane transporter activity IEP Enrichment
MF GO:0015109 chromate transmembrane transporter activity IEP Enrichment
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Enrichment
MF GO:0016829 lyase activity IEP Enrichment
MF GO:0016852 sirohydrochlorin cobaltochelatase activity IEP Enrichment
MF GO:0016859 cis-trans isomerase activity IEP Enrichment
MF GO:0016994 precorrin-6A reductase activity IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
MF GO:0017171 serine hydrolase activity IEP Enrichment
BP GO:0019251 anaerobic cobalamin biosynthetic process IEP Enrichment
BP GO:0019692 deoxyribose phosphate metabolic process IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
BP GO:0033036 macromolecule localization IEP Enrichment
BP GO:0034470 ncRNA processing IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
BP GO:0044238 primary metabolic process IEP Enrichment
BP GO:0045184 establishment of protein localization IEP Enrichment
BP GO:0046073 dTMP metabolic process IEP Enrichment
BP GO:0046385 deoxyribose phosphate biosynthetic process IEP Enrichment
MF GO:0046914 transition metal ion binding IEP Enrichment
MF GO:0050660 flavin adenine dinucleotide binding IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
BP GO:0090407 organophosphate biosynthetic process IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
MF GO:0140096 catalytic activity, acting on a protein IEP Enrichment
BP GO:1901137 carbohydrate derivative biosynthetic process IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
BP GO:1901293 nucleoside phosphate biosynthetic process IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR003722 Cbl_synth_CobH/CbiC 9 208
UniProtKB U3X0T0