AGT23825 (N559_2107)


Aliases : N559_2107

Description : phenylalanyl-tRNA synthetase subunit beta [Ensembl]. B3/4 domain, tRNA synthetase B5 domain, Phenylalanyl tRNA synthetase beta chain CLM domain, Ferredoxin-fold anticodon binding domain, Putative tRNA binding domain, B3/B4 tRNA-binding domain, B5-domain, core domain, Ferrodoxin-fold anticodon-binding domain [InterProScan].


Gene families : OG_02_0000456 (OrthoFinder) Phylogenetic Tree(s): OG0000456_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AGT23825
Cluster HCCA: Cluster_44

Target Alias Description ECC score Gene Family Method Actions
AAC74783 pheT, b1713 phenylalanine tRNA synthetase, beta subunit [Ensembl].... 0.06 OrthoFinder
AAK99313 spr0509, pheT Phenylalanyl-tRNA synthetase beta chain [Ensembl]. B3/4... 0.07 OrthoFinder
AEA93581 pheT, OG1RF_10894 phenylalanyl-tRNA synthetase beta subunit [Ensembl].... 0.01 OrthoFinder
AKI49150 pheT, L2625_01240 phenylalanyl-tRNA synthetase, beta subunit [Ensembl].... 0.14 OrthoFinder
AKP15679 pheT, WX61_01642 Phenylalanine--tRNA ligase beta subunit [Ensembl]. B3/4... 0.04 OrthoFinder
CBI66010 pheT, HPB8_453 phenylalanyl-tRNA synthetase beta chain [Ensembl]. tRNA... 0.02 OrthoFinder
CCG26756 No alias Phenylalanyl-tRNA synthetase beta chain [Ensembl]. tRNA... 0.08 OrthoFinder
CCL20698 pheT, BN171_940002 Phenylalanyl-tRNA synthetase subunit beta... 0.1 OrthoFinder
CPC38858 pheT_1, ERS093114_00286 Phenylalanyl-tRNA synthetase beta chain [Ensembl]. B3/4... 0.06 OrthoFinder
CRO66814 pheT Phenylalanine--tRNA ligase beta subunit [Ensembl]. B3/4... 0.07 OrthoFinder
KNA56147 VCV51_032987 phenylalanyl-tRNA synthetase [Ensembl]. B3/4 domain,... 0.11 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEA Interproscan
MF GO:0000287 magnesium ion binding IEA Interproscan
MF GO:0003723 RNA binding IEA Interproscan
MF GO:0004826 phenylalanine-tRNA ligase activity IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0006432 phenylalanyl-tRNA aminoacylation IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP Enrichment
MF GO:0003735 structural constituent of ribosome IEP Enrichment
MF GO:0003747 translation release factor activity IEP Enrichment
MF GO:0003855 3-dehydroquinate dehydratase activity IEP Enrichment
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Enrichment
MF GO:0003916 DNA topoisomerase activity IEP Enrichment
MF GO:0003918 DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity IEP Enrichment
MF GO:0003922 GMP synthase (glutamine-hydrolyzing) activity IEP Enrichment
MF GO:0003924 GTPase activity IEP Enrichment
MF GO:0004129 cytochrome-c oxidase activity IEP Enrichment
MF GO:0004814 arginine-tRNA ligase activity IEP Enrichment
MF GO:0004820 glycine-tRNA ligase activity IEP Enrichment
MF GO:0004832 valine-tRNA ligase activity IEP Enrichment
MF GO:0005198 structural molecule activity IEP Enrichment
MF GO:0005216 ion channel activity IEP Enrichment
MF GO:0005261 cation channel activity IEP Enrichment
MF GO:0005525 GTP binding IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
CC GO:0005737 cytoplasm IEP Enrichment
CC GO:0005840 ribosome IEP Enrichment
BP GO:0006081 cellular aldehyde metabolic process IEP Enrichment
BP GO:0006163 purine nucleotide metabolic process IEP Enrichment
BP GO:0006164 purine nucleotide biosynthetic process IEP Enrichment
BP GO:0006177 GMP biosynthetic process IEP Enrichment
BP GO:0006265 DNA topological change IEP Enrichment
BP GO:0006304 DNA modification IEP Enrichment
BP GO:0006305 DNA alkylation IEP Enrichment
BP GO:0006306 DNA methylation IEP Enrichment
BP GO:0006323 DNA packaging IEP Enrichment
BP GO:0006351 transcription, DNA-templated IEP Enrichment
BP GO:0006412 translation IEP Enrichment
BP GO:0006415 translational termination IEP Enrichment
BP GO:0006420 arginyl-tRNA aminoacylation IEP Enrichment
BP GO:0006426 glycyl-tRNA aminoacylation IEP Enrichment
BP GO:0006438 valyl-tRNA aminoacylation IEP Enrichment
BP GO:0006518 peptide metabolic process IEP Enrichment
BP GO:0006753 nucleoside phosphate metabolic process IEP Enrichment
BP GO:0006754 ATP biosynthetic process IEP Enrichment
BP GO:0006793 phosphorus metabolic process IEP Enrichment
BP GO:0006796 phosphate-containing compound metabolic process IEP Enrichment
BP GO:0006812 cation transport IEP Enrichment
BP GO:0006996 organelle organization IEP Enrichment
BP GO:0007059 chromosome segregation IEP Enrichment
MF GO:0008079 translation termination factor activity IEP Enrichment
MF GO:0008094 ATPase, acting on DNA IEP Enrichment
MF GO:0008168 methyltransferase activity IEP Enrichment
MF GO:0008324 cation transmembrane transporter activity IEP Enrichment
MF GO:0009002 serine-type D-Ala-D-Ala carboxypeptidase activity IEP Enrichment
MF GO:0009007 site-specific DNA-methyltransferase (adenine-specific) activity IEP Enrichment
MF GO:0009008 DNA-methyltransferase activity IEP Enrichment
BP GO:0009058 biosynthetic process IEP Enrichment
BP GO:0009059 macromolecule biosynthetic process IEP Enrichment
BP GO:0009117 nucleotide metabolic process IEP Enrichment
BP GO:0009123 nucleoside monophosphate metabolic process IEP Enrichment
BP GO:0009124 nucleoside monophosphate biosynthetic process IEP Enrichment
BP GO:0009126 purine nucleoside monophosphate metabolic process IEP Enrichment
BP GO:0009127 purine nucleoside monophosphate biosynthetic process IEP Enrichment
BP GO:0009141 nucleoside triphosphate metabolic process IEP Enrichment
BP GO:0009142 nucleoside triphosphate biosynthetic process IEP Enrichment
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP Enrichment
BP GO:0009145 purine nucleoside triphosphate biosynthetic process IEP Enrichment
BP GO:0009150 purine ribonucleotide metabolic process IEP Enrichment
BP GO:0009152 purine ribonucleotide biosynthetic process IEP Enrichment
BP GO:0009156 ribonucleoside monophosphate biosynthetic process IEP Enrichment
BP GO:0009161 ribonucleoside monophosphate metabolic process IEP Enrichment
BP GO:0009165 nucleotide biosynthetic process IEP Enrichment
BP GO:0009167 purine ribonucleoside monophosphate metabolic process IEP Enrichment
BP GO:0009168 purine ribonucleoside monophosphate biosynthetic process IEP Enrichment
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP Enrichment
BP GO:0009201 ribonucleoside triphosphate biosynthetic process IEP Enrichment
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP Enrichment
BP GO:0009206 purine ribonucleoside triphosphate biosynthetic process IEP Enrichment
BP GO:0009240 isopentenyl diphosphate biosynthetic process IEP Enrichment
BP GO:0009259 ribonucleotide metabolic process IEP Enrichment
BP GO:0009260 ribonucleotide biosynthetic process IEP Enrichment
CC GO:0009295 nucleoid IEP Enrichment
MF GO:0015078 proton transmembrane transporter activity IEP Enrichment
MF GO:0015252 proton channel activity IEP Enrichment
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Enrichment
BP GO:0015985 energy coupled proton transport, down electrochemical gradient IEP Enrichment
BP GO:0015986 ATP synthesis coupled proton transport IEP Enrichment
BP GO:0016043 cellular component organization IEP Enrichment
MF GO:0016462 pyrophosphatase activity IEP Enrichment
MF GO:0016675 oxidoreductase activity, acting on a heme group of donors IEP Enrichment
MF GO:0016726 oxidoreductase activity, acting on CH or CH2 groups, NAD or NADP as acceptor IEP Enrichment
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Enrichment
MF GO:0016779 nucleotidyltransferase activity IEP Enrichment
MF GO:0016787 hydrolase activity IEP Enrichment
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Enrichment
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Enrichment
MF GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor IEP Enrichment
MF GO:0017111 nucleoside-triphosphatase activity IEP Enrichment
BP GO:0018130 heterocycle biosynthetic process IEP Enrichment
MF GO:0019001 guanyl nucleotide binding IEP Enrichment
BP GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway IEP Enrichment
BP GO:0019438 aromatic compound biosynthetic process IEP Enrichment
BP GO:0019538 protein metabolic process IEP Enrichment
BP GO:0019637 organophosphate metabolic process IEP Enrichment
BP GO:0019682 glyceraldehyde-3-phosphate metabolic process IEP Enrichment
BP GO:0019693 ribose phosphate metabolic process IEP Enrichment
MF GO:0019843 rRNA binding IEP Enrichment
BP GO:0022411 cellular component disassembly IEP Enrichment
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Enrichment
BP GO:0030261 chromosome condensation IEP Enrichment
MF GO:0032561 guanyl ribonucleotide binding IEP Enrichment
BP GO:0032774 RNA biosynthetic process IEP Enrichment
BP GO:0032775 DNA methylation on adenine IEP Enrichment
BP GO:0032984 protein-containing complex disassembly IEP Enrichment
CC GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain IEP Enrichment
MF GO:0034062 5'-3' RNA polymerase activity IEP Enrichment
BP GO:0034220 ion transmembrane transport IEP Enrichment
BP GO:0034645 cellular macromolecule biosynthetic process IEP Enrichment
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Enrichment
BP GO:0043043 peptide biosynthetic process IEP Enrichment
CC GO:0043226 organelle IEP Enrichment
CC GO:0043228 non-membrane-bounded organelle IEP Enrichment
CC GO:0043229 intracellular organelle IEP Enrichment
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Enrichment
BP GO:0043603 cellular amide metabolic process IEP Enrichment
BP GO:0043604 amide biosynthetic process IEP Enrichment
BP GO:0043624 cellular protein complex disassembly IEP Enrichment
BP GO:0044249 cellular biosynthetic process IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
BP GO:0044267 cellular protein metabolic process IEP Enrichment
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Enrichment
BP GO:0044728 DNA methylation or demethylation IEP Enrichment
CC GO:0045261 proton-transporting ATP synthase complex, catalytic core F(1) IEP Enrichment
BP GO:0046034 ATP metabolic process IEP Enrichment
BP GO:0046037 GMP metabolic process IEP Enrichment
BP GO:0046390 ribose phosphate biosynthetic process IEP Enrichment
BP GO:0046490 isopentenyl diphosphate metabolic process IEP Enrichment
MF GO:0046933 proton-transporting ATP synthase activity, rotational mechanism IEP Enrichment
BP GO:0050992 dimethylallyl diphosphate biosynthetic process IEP Enrichment
BP GO:0050993 dimethylallyl diphosphate metabolic process IEP Enrichment
BP GO:0051276 chromosome organization IEP Enrichment
MF GO:0051745 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity IEP Enrichment
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP Enrichment
BP GO:0071103 DNA conformation change IEP Enrichment
BP GO:0071840 cellular component organization or biogenesis IEP Enrichment
BP GO:0072521 purine-containing compound metabolic process IEP Enrichment
BP GO:0072522 purine-containing compound biosynthetic process IEP Enrichment
BP GO:0090407 organophosphate biosynthetic process IEP Enrichment
BP GO:0097659 nucleic acid-templated transcription IEP Enrichment
MF GO:0097747 RNA polymerase activity IEP Enrichment
BP GO:0098655 cation transmembrane transport IEP Enrichment
BP GO:0098660 inorganic ion transmembrane transport IEP Enrichment
BP GO:0098662 inorganic cation transmembrane transport IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
MF GO:0140097 catalytic activity, acting on DNA IEP Enrichment
BP GO:1901135 carbohydrate derivative metabolic process IEP Enrichment
BP GO:1901137 carbohydrate derivative biosynthetic process IEP Enrichment
BP GO:1901293 nucleoside phosphate biosynthetic process IEP Enrichment
BP GO:1901362 organic cyclic compound biosynthetic process IEP Enrichment
BP GO:1901566 organonitrogen compound biosynthetic process IEP Enrichment
BP GO:1901576 organic substance biosynthetic process IEP Enrichment
BP GO:1902600 proton transmembrane transport IEP Enrichment
InterPro domains Description Start Stop
IPR005146 B3/B4_tRNA-bd 212 385
IPR005147 tRNA_synthase_B5-dom 406 471
IPR041616 PheRS_beta_core 474 685
IPR005121 Fdx_antiC-bd 701 794
IPR002547 tRNA-bd_dom 45 145
No external refs found!